RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ASTE1Q2TB18 679 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 CRB2Q5IJ48 1285 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 FNBP1LQ5T0N5 605 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF385CQ66K41 422 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 MICALCLQ6ZW33 695 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 MAMDC2Q7Z304 686 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 VSIG1Q86XK7 387 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 OR8K5Q8NH50 307 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 PNPLA2Q96AD5 504 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SNRNP40Q96DI7 357 aaKnown RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 MRGPRX2Q96LB1 330 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 C12orf66Q96MD2 445 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 RANBP9Q96S59 729 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 NLNQ9BYT8 704 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 NAT10Q9H0A0 1025 aaKnown RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 KIR3DX1Q9H7L2 352 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SMOXQ9NWM0 555 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 POMT2Q9UKY4 750 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SNX7Q9UNH6 387 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 DNMT3AQ9Y6K1 912 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SPTBP11277 2137 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 A0A0A6YYK5 440 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-225ENST00000586385 GLYATL1P3A0A0U1RQE8 302 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 MGAT4DA6NG13 374 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 DPM1O60762 260 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 CBX6O95503 412 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 SERPINC1P01008 464 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 H2AFZP0C0S5 128 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-225ENST00000586385 POLR2CP19387 275 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-225ENST00000586385 NFKB1P19838 968 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 ARL4DP49703 201 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 VAV2P52735 878 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 GSDMDP57764 484 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 DYNLT1P63172 113 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 FANCCQ00597 558 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 PDE1BQ01064 536 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 ADCY2Q08462 1091 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 RAPSNQ13702 412 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 MESDQ14696 234 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 PTCHD3Q3KNS1 767 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-225ENST00000586385 LDLRAP1Q5SW96 308 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 MFSD7Q6UXD7 560 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 H2AFVQ71UI9 128 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 DET1Q7L5Y6 550 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 DAAM2Q86T65 1068 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 OOSP2Q86WS3 158 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 SYTL1Q8IYJ3 562 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 CARFQ8N187 725 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 SLC25A41Q8N5S1 370 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 INPP5DQ92835 1189 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 SRPK1Q96SB4 655 aaKnown RBP11.56□□□□□ -0.56
BRCA1-225ENST00000586385 GORASP1Q9BQQ3 440 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 TRABDQ9H4I3 376 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 ASF1BQ9NVP2 202 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
BRCA1-225ENST00000586385 CENPEQ02224 2701 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 CELSR2Q9HCU4 2923 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 H3BMH7 237 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 MASP2O00187 686 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 BTN3A3O00478 584 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 PPP1R12AO14974 1030 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 KLF7O75840 302 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 EPOP01588 193 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 KLK3P07288 261 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 ST6GAL1P15907 406 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 FOXL2P58012 376 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 XRCC4Q13426 336 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 NCF4Q15080 339 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 NR6A1Q15406 480 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 SLC1A5Q15758 541 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 PPP2R5EQ16537 467 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 TAZQ16635 292 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 SPOCD1Q6ZMY3 1216 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 RFX6Q8HWS3 928 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 OR4E2Q8NGC2 313 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 OR2L2Q8NH16 312 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 ZFPM2Q8WW38 1151 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 CPT1BQ92523 772 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 PITPNM3Q9BZ71 974 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 ZCCHC2Q9C0B9 1178 aaKnown RBP11.55□□□□□ -0.56
BRCA1-225ENST00000586385 SLAMF7Q9NQ25 335 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 GPR83Q9NYM4 423 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 FAM8A1Q9UBU6 413 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 NTNG1Q9Y2I2 539 aa11.55□□□□□ -0.56
BRCA1-225ENST00000586385 PRRC2CQ9Y520 2896 aaKnown RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ABCA12Q86UK0 2595 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 TMEM150CB9EJG8 249 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 BTN3A1O00481 513 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 HCRTR1O43613 425 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 CNOT3O75175 753 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms