RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ATP6V1E2Q96A05 226 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 C3orf30Q96M34 536 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ZSCAN5AQ9BUG6 496 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 TUBB1Q9H4B7 451 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 EPHX3Q9H6B9 360 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PCDH12Q9NPG4 1184 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 GID8Q9NWU2 228 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 THG1LQ9NWX6 298 aaKnown RBP11.08□□□□□ -0.64
LIG3-204ENST00000585740 CACNA2D2Q9NY47 1150 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CCDC167Q9P0B6 97 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CROTQ9UKG9 612 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CHD9Q3L8U1 2897 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 BPTFQ12830 3046 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 EDDM13A0A1B0GTR0 161 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 DYTNA2CJ06 578 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 K7EPI3 171 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 PPP6CO00743 305 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 CFLARO15519 480 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 NUAK1O60285 661 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 KATNA1O75449 491 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ARHGEF15O94989 841 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 OR4F21O95013 312 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 STAMBPO95630 424 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ALDOCP09972 364 aaKnown RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 LINC00032P0C843 101 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 HGFP14210 728 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ACADSP16219 412 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 PCSK2P16519 638 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 FSHRP23945 695 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 AOAHP28039 575 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 HMOX2P30519 316 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 AKT1P31749 480 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 CA5AP35218 305 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 GTF2A1P52655 376 aaPredicted RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 SESN3P58005 492 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ERVK-8P63133 956 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 CCNIQ14094 377 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 LRP8Q14114 963 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 GBX1Q14549 363 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 CBX2Q14781 532 aaPredicted RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 HPS6Q86YV9 775 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ETFBKMTQ8IXQ9 262 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 CLDN19Q8N6F1 224 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 SLC26A7Q8TE54 656 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 UCMAQ8WVF2 138 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 DNAJC9Q8WXX5 260 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 OR8D1Q8WZ84 308 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 SMARCD2Q92925 531 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 PPP2R3CQ969Q6 453 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 RHBDF1Q96CC6 855 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 MAGEB10Q96LZ2 347 aaPredicted RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 VPS35Q96QK1 796 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 KCNA7Q96RP8 456 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 NPAS2Q99743 824 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 HOPXQ9BPY8 73 aaPredicted RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 CD244Q9BZW8 370 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 NOL11Q9H8H0 719 aaKnown RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 TRPV4Q9HBA0 871 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 SDR39U1Q9NRG7 319 aaPredicted RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 AIG1Q9NVV5 245 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ELOVL2Q9NXB9 296 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 GDE1Q9NZC3 331 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 ZIM2Q9NZV7 527 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 DEC1Q9P2X7 70 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 EPS15L1Q9UBC2 864 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 OPTCQ9UBM4 332 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 SUCOQ9UBS9 1254 aaKnown RBP11.07□□□□□ -0.64
LIG3-204ENST00000585740 TRPS1Q9UHF7 1281 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 MCM8Q9UJA3 840 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 BTRCQ9Y297 605 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
LIG3-204ENST00000585740 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ATP6AP2A0A1C7CYW4 349 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 H0Y858 1186 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 SLC28A1O00337 649 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 ANGPT2O15123 496 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TULP3O75386 442 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ATP6AP2O75787 350 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 BAG2O95816 211 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 HIST1H2AGP0C0S8 130 aaPredicted RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 EBLN1P0CF75 366 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 MYOGP15173 224 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 HIST1H2ADP20671 130 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 CYP2A7P20853 494 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ATP6V1C1P21283 382 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 HNMTP50135 292 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ERVPABLB-1P60509 514 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 B4GALNT1Q00973 533 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 FOXM1Q08050 763 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ELP6Q0PNE2 266 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 MAD2L1Q13257 205 aaPredicted RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 GRB7Q14451 532 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms