RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 INPP5JQ15735 1006 aaPredicted RBP14.1□□□□□ -0.15
SDF2-202ENST00000585428 PPP2R5EQ16537 467 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 FNBP1LQ5T0N5 605 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 PRAMEF17Q5VTA0 474 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 PID1Q7Z2X4 250 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 OOSP2Q86WS3 158 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 TMEM126BQ8IUX1 230 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 RHOT1Q8IXI2 618 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 DSELQ8IZU8 1212 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 SLC25A41Q8N5S1 370 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 MR1Q95460 341 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 LINC00615Q96LM1 132 aaPredicted RBP14.1□□□□□ -0.15
SDF2-202ENST00000585428 PPM1MQ96MI6 270 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 NLNQ9BYT8 704 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 WWP1Q9H0M0 922 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 IMP3Q9NV31 184 aaKnown RBP14.1□□□□□ -0.15
SDF2-202ENST00000585428 CUEDC1Q9NWM3 386 aaPredicted RBP14.1□□□□□ -0.15
SDF2-202ENST00000585428 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
SDF2-202ENST00000585428 USP9XQ93008 2570 aaPredicted RBP14.1□□□□□ -0.15
SDF2-202ENST00000585428 NBPF19A0A087WUL8 3843 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 AGAP14A8MT82 685 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 CST8O60676 142 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 KRT1P04264 644 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 MSL3P1P0C860 447 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 PECAM1P16284 738 aaPredicted RBP14.09□□□□□ -0.15
SDF2-202ENST00000585428 HLA-DPA1P20036 260 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 RORAP35398 523 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 PTGIRP43119 386 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 XRCC4Q13426 336 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 PTPRCAPQ14761 206 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 LONRF2Q1L5Z9 754 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 TMTC4Q5T4D3 741 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 JMJD6Q6NYC1 403 aaPredicted RBP14.09□□□□□ -0.15
SDF2-202ENST00000585428 FBXO38Q6PIJ6 1188 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 RHOT2Q8IXI1 618 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 ZNF567Q8N184 647 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 Q8NA96 180 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 BLOC1S5Q8TDH9 187 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 SSC4DQ8WTU2 575 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 C12orf66Q96MD2 445 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 VAT1Q99536 393 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 CHP1Q99653 195 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 C1GALT1Q9NS00 363 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 TCFL5Q9UL49 500 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 ZNF451Q9Y4E5 1061 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 COLEC10Q9Y6Z7 277 aa14.09□□□□□ -0.15
SDF2-202ENST00000585428 SLC9B1P1A6NJY1 282 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 TCP11X1B4DZS4 312 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 AKR1B10O60218 316 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 TMEM63AO94886 807 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 LCA5LO95447 670 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 MSH3P20585 1137 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 COMTP21964 271 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 ITGA1P56199 1179 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 MPP3Q13368 585 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 MSLNQ13421 630 aaPredicted RBP14.08□□□□□ -0.16
SDF2-202ENST00000585428 TFDP2Q14188 446 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 BCL7AQ4VC05 210 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 ZNF789Q5FWF6 425 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 ARMC6Q6NXE6 501 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 DUS1LQ6P1R4 473 aaKnown RBP14.08□□□□□ -0.16
SDF2-202ENST00000585428 MED25Q71SY5 747 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 DET1Q7L5Y6 550 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 GLIS1Q8NBF1 620 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 FDCSPQ8NFU4 85 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 OR4E2Q8NGC2 313 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 CPT1BQ92523 772 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 HYOU1Q9Y4L1 999 aa14.08□□□□□ -0.16
SDF2-202ENST00000585428 SYCE3A1L190 88 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 WIPF3A6NGB9 483 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 STX7O15400 261 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 DPM1O60762 260 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 AGTP01019 485 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 RNF224P0DH78 156 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 PYGMP11217 842 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 POLR2CP19387 275 aaPredicted RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 PBLDP30039 288 aaPredicted RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 PRDX3P30048 256 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 XIAPP98170 497 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 ABRQ12979 859 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 EIF2S3LQ2VIR3 472 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 ODF2Q5BJF6 829 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 FAM69BQ5VUD6 431 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 RANBP10Q6VN20 620 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 ZC3H18Q86VM9 953 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 HPS6Q86YV9 775 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 CFAP206Q8IYR0 622 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 ZBTB2Q8N680 514 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 RBMXL3Q8N7X1 1067 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 ENDOVQ8N8Q3 282 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 TMEM102Q8N9M5 508 aaPredicted RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 NAT14Q8WUY8 206 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 P3H4Q92791 437 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 SMAD5Q99717 465 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 CCM2Q9BSQ5 444 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 NUDT9Q9BW91 350 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 SYTL2Q9HCH5 934 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms