RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 BFSP1Q12934 665 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 COASYQ13057 564 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TAZQ16635 292 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 QRICH1Q2TAL8 776 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ALG10Q5BKT4 473 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ALG10BQ5I7T1 473 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DAB2IPQ5VWQ8 1189 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT79Q5XKE5 535 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 H1FNTQ75WM6 255 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SDCCAG8Q86SQ7 713 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PEG10Q86TG7 708 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 BRSK2Q8IWQ3 736 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ADGRF4Q8IZF3 695 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC4A11Q8NBS3 891 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CMASQ8NFW8 434 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MSI2Q96DH6 328 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 VCPIP1Q96JH7 1222 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 C8orf76Q96K31 380 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LYZL4Q96KX0 146 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM68Q96MH6 324 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RUNDC3BQ96NL0 473 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 FIZ1Q96SL8 496 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DONSONQ9NYP3 566 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 FOXJ2Q9P0K8 574 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC9A2Q9UBY0 812 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MAD2L2Q9UI95 211 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LEF1Q9UJU2 399 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IGSF9BQ9UPX0 1349 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA0100Q14667 2235 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1217Q5T5P2 1943 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1671Q9BY89 1806 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A0D9SFI3 127 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TRBC2A0A5B9 178 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MBLAC1A4D2B0 266 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 USP17L23D6RBM5 183 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 H3BQV1 296 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 M0QYT0 321 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 STX6O43752 255 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PIGRP01833 764 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SRPRAP08240 638 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PDHA1P08559 390 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP21A2P08686 494 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC172P0C7W6 258 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TCEA1P23193 301 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 EEF1B2P24534 225 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 U2AF2P26368 475 aaKnown RBP eCLIP1.93□□□□□ -2.17e-7■■■□□ 15.5
SMCHD1-211ENST00000584897 HOXA9P31269 272 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ANP32AP39687 249 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 NAMPTP43490 491 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCR5P51681 352 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RBP5P82980 135 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SORDQ00796 357 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ROR1Q01973 937 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 AP1B1Q10567 949 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TCP10Q12799 353 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SEMA3AQ14563 771 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF268Q14587 947 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PGM5Q15124 567 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SNAPC1Q16533 368 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SMU1Q2TAY7 513 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF805Q5CZA5 627 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF766Q5HY98 468 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SERTAD4-AS1Q5TG53 156 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SFMBT2Q5VUG0 894 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 METRNLQ641Q3 311 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1161Q6NSJ0 714 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIRREL2Q6UWL6 708 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PTCHD4Q6ZW05 846 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IQCHQ86VS3 1027 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM200AQ86VY9 491 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC25Q86WR0 208 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZDHHC17Q8IUH5 632 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 C12orf56Q8IXR9 622 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SIX6OS1Q8N1H7 587 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 Q8NA96 180 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MIGA1Q8NAN2 632 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TSPAN14Q8NG11 270 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TEKT4Q8WW24 435 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MYCBPQ99417 103 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM204Q9BSN7 226 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HEMGNQ9BXL5 484 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CIPCQ9C0C6 399 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KLK15Q9H2R5 256 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TNMDQ9H2S6 317 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PLK3Q9H4B4 646 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SNTG1Q9NSN8 517 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ASB6Q9NWX5 421 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PSD3Q9NYI0 1048 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LARSQ9P2J5 1176 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 EXTL2Q9UBQ6 330 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DKK2Q9UBU2 259 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RIMKLBQ9ULI2 386 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 A4GNTQ9UNA3 340 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CARD8Q9Y2G2 431 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 COPG1Q9Y678 874 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC187A0A096LP49 1063 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SMCO2A6NFE2 343 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 C5orf67F2Z3F1 127 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX39AO00148 427 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC30A4O14863 429 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms