RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 HCFC1R1Q9NWW0 138 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 WWOXQ9NZC7 414 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.25
SRSF1-205ENST00000582730 CCDC154A6NI56 674 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 FFAR3O14843 346 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 GPR42O15529 346 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SLC22A3O75751 556 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 ATP6V1B2P21281 511 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SPAM1P38567 509 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-205ENST00000582730 GTF2H2Q13888 395 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SGO1Q5FBB7 561 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 GTF2H2CQ6P1K8 395 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SBSNQ6UWP8 590 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 CMTR2Q8IYT2 770 aaKnown RBP13.46□□□□□ -0.25
SRSF1-205ENST00000582730 OR4F6Q8NGB9 312 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 SLC2A11Q9BYW1 496 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 IPPKQ9H8X2 491 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 CCL26Q9Y258 94 aa13.46□□□□□ -0.25
SRSF1-205ENST00000582730 GAPDHSO14556 408 aaPredicted RBP13.46□□□□□ -0.26
SRSF1-205ENST00000582730 ACRV1P26436 265 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 PPM1AP35813 382 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 CBX3Q13185 183 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 MTX3Q5HYI7 312 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 HACD2Q6Y1H2 254 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 ERI1Q8IV48 349 aaKnown RBP13.46□□□□□ -0.26
SRSF1-205ENST00000582730 MYLIPQ8WY64 445 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 GBF1Q92538 1859 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 ZNF382Q96SR6 550 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 CCT7Q99832 543 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 HOPXQ9BPY8 73 aaPredicted RBP13.46□□□□□ -0.26
SRSF1-205ENST00000582730 SLC46A2Q9BY10 475 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.26
SRSF1-205ENST00000582730 ASAH2Q9NR71 780 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 PADI4Q9UM07 663 aa13.46□□□□□ -0.26
SRSF1-205ENST00000582730 NEDD8-MDP1E9PL57 170 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 UGT2B4P06133 528 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 MAPK8P45983 427 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 PSMD8P48556 350 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 SNRPD1P62314 119 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 ADRM1Q16186 407 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 PHKG1Q16816 387 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 RABL3Q5HYI8 236 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 HTR3DQ70Z44 454 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 ADGRG2Q8IZP9 1017 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 ZBTB2Q8N680 514 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TRIML2Q8N7C3 387 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TSPAN14Q8NG11 270 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 FAM110BQ8TC76 370 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 GRIN3AQ8TCU5 1115 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 CANT1Q8WVQ1 401 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 C1QTNF3Q9BXJ4 246 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 CNOT6Q9ULM6 557 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 FAF1Q9UNN5 650 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 GFRA2O00451 464 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 MATN4O95460 622 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 C8BP07358 591 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 SRCP12931 536 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 PSMC3P17980 439 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 DGKAP23743 735 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 HLA-FP30511 346 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 STT3AP46977 705 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 ERVK-8P63133 956 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 RFLNAQ6ZTI6 216 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 DET1Q7L5Y6 550 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TMC8Q8IU68 726 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 OR2T34Q8NGX1 318 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 OR2T3Q8NH03 318 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 FIBINQ8TAL6 211 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 GFM2Q969S9 779 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 CIB1Q99828 191 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 BEGAINQ9BUH8 593 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 CMTM6Q9NX76 183 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 CD84Q9UIB8 345 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 RNF11Q9Y3C5 154 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
SRSF1-205ENST00000582730 V9GYQ6 96 aa13.45□□□□□ -0.26
SRSF1-205ENST00000582730 FXYD1O00168 92 aa13.44□□□□□ -0.26
SRSF1-205ENST00000582730 SOCS5O75159 536 aa13.44□□□□□ -0.26
SRSF1-205ENST00000582730 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms