RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 LRRC42Q9Y546 428 aa22.28■■□□□ 1.16
CCDC47-204ENST00000582252 PLXNA2O75051 1894 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 QSOX1O00391 747 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 TRIM24O15164 1050 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 NVLO15381 856 aaKnown RBP22.27■■□□□ 1.16
CCDC47-204ENST00000582252 NRP2O60462 931 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 MATN4O95460 622 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 HGFP14210 728 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 GPX3P22352 226 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 ME2P23368 584 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 AKT1P31749 480 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 MRPL19P49406 292 aaKnown RBP22.27■■□□□ 1.16
CCDC47-204ENST00000582252 FCHO2Q0JRZ9 810 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 GRIK2Q13002 908 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 TTC23LQ6PF05 361 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 VITQ6UXI7 678 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 GOLGA7Q7Z5G4 137 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 PHYKPLQ8IUZ5 450 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 HMGCLL1Q8TB92 370 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 SLC26A7Q8TE54 656 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 UBTD2Q8WUN7 234 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 ATP6V1E2Q96A05 226 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 ELSPBP1Q96BH3 223 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 FBRSL1Q9HCM7 1045 aaKnown RBP22.27■■□□□ 1.16
CCDC47-204ENST00000582252 CACNA2D2Q9NY47 1150 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 WWOXQ9NZC7 414 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 SARDHQ9UL12 918 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 ANGPTL3Q9Y5C1 460 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 PIKFYVEQ9Y2I7 2098 aa22.27■■□□□ 1.16
CCDC47-204ENST00000582252 PABPN1LA6NDY0 278 aaKnown RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ENO2P09104 434 aaPredicted RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 CD1EP15812 388 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ARL1P40616 181 aaPredicted RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 PIK3CGP48736 1102 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 CCNIQ14094 377 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 CMPK2Q5EBM0 449 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 XKR7Q5GH72 579 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ERAP2Q6P179 960 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 MTSS1LQ765P7 747 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 DPPA4Q7L190 304 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TRAM1L1Q8N609 369 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 SORCS1Q8WY21 1168 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ROPN1LQ96C74 230 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 FAM83CQ9BQN1 747 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 NOL11Q9H8H0 719 aaKnown RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 PCDH12Q9NPG4 1184 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TIMM22Q9Y584 194 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 MRASO14807 208 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 AP2A2O94973 939 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 OR4F21O95013 312 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 PRR35P0CG20 571 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ATP1B2P14415 290 aaPredicted RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TIMP2P16035 220 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 GTF2A1P52655 376 aaPredicted RBP22.26■■□□□ 1.15
CCDC47-204ENST00000582252 PSME3P61289 254 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 LRP8Q14114 963 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ZNF423Q2M1K9 1284 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 LRRC73Q5JTD7 316 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 PLEKHS1Q5SXH7 462 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TRIM68Q6AZZ1 485 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 YAF2Q8IY57 180 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TSPEARQ8WU66 669 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ESAMQ96AP7 390 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ZSCAN5AQ9BUG6 496 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 TRIM54Q9BYV2 358 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 ELOVL2Q9NXB9 296 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 OPTCQ9UBM4 332 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 NDUFAF1Q9Y375 327 aa22.26■■□□□ 1.15
CCDC47-204ENST00000582252 H3BQ06 376 aaPredicted RBP22.25■■□□□ 1.15
CCDC47-204ENST00000582252 TRIM38O00635 465 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 MAP3K7O43318 606 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 TULP3O75386 442 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 PRNPP04156 253 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 C8GP07360 202 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 ANXA5P08758 320 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 MPC1LP0DKB6 136 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 ARSAP15289 507 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 PRDX3P30048 256 aaKnown RBP22.25■■□□□ 1.15
CCDC47-204ENST00000582252 B4GALNT1Q00973 533 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 GRB7Q14451 532 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 ZNF284Q2VY69 593 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 PAOXQ6QHF9 649 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 RAVER1Q8IY67 606 aaKnown RBP22.25■■□□□ 1.15
CCDC47-204ENST00000582252 TCAIMQ8N3R3 496 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 MYLIPQ8WY64 445 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 CD244Q9BZW8 370 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 SDR39U1Q9NRG7 319 aaPredicted RBP22.25■■□□□ 1.15
CCDC47-204ENST00000582252 TMEM45AQ9NWC5 275 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 EPS15L1Q9UBC2 864 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 MCM8Q9UJA3 840 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 ZNF225Q9UK10 706 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 ADAMTS6Q9UKP5 1117 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 PTGDR2Q9Y5Y4 395 aa22.25■■□□□ 1.15
CCDC47-204ENST00000582252 A0A1B0GTL3 188 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 BAG2O95816 211 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 GUCA1CO95843 209 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 PSMC3P17980 439 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 AOAHP28039 575 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 PSMD8P48556 350 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 EIF4HQ15056 248 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms