RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NOTCH4Q99466 2003 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 ZCWPW2A0A1B0GU75 182 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 TRBC2A0A5B9 178 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 H7C0S8 307 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 EIF3DO15371 548 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 KRT19P08727 400 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 FAM106CPP0CH98 169 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 CDH1P12830 882 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 PFKFB1P16118 471 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 EEF1DP29692 281 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 MC5RP33032 325 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 GAGE2BQ13066 116 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 PLA2G7Q13093 441 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 KIF19Q2TAC6 998 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 RAB6CQ53S08 254 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 ARMC3Q5W041 872 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 GAGE2AQ6NT46 116 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 FAM171BQ6P995 826 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 PRSS57Q6UWY2 283 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 TC2NQ8N9U0 490 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 KCNH5Q8NCM2 988 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 TSPAN14Q8NG11 270 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 OR10S1Q8NGN2 331 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 TMEM255BQ8WV15 326 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 SEMA4DQ92854 862 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 VPS33AQ96AX1 596 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 NXNL1Q96CM4 212 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 RMDN1Q96DB5 314 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 OXNAD1Q96HP4 312 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 OR6C1Q96RD1 312 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 OLFM1Q99784 485 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 NEURL2Q9BR09 285 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 GPR88Q9GZN0 384 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 RAB6CQ9H0N0 254 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 RETREG1Q9H6L5 497 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 SLA2Q9H6Q3 261 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 ZCCHC17Q9NP64 241 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 POU2F3Q9UKI9 436 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 ZHX1Q9UKY1 873 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 YIPF1Q9Y548 306 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 PCDHAC2Q9Y5I4 1007 aa4.5□□□□□ -1.69
SMCHD1-205ENST00000581383 ZNF541Q9H0D2 1346 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 SAA2-SAA4A0A096LPE2 208 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 HEPACAM2A8MVW5 462 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 A8MXE2 369 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 ANKRD66B4E2M5 251 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 XRCC3O43542 346 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 SPRY1O43609 319 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 TRUB2O95900 331 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 ARCN1P48444 511 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 CSE1LP55060 971 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 EEF1A1P68104 462 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 CDK3Q00526 305 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 TROAPQ12815 778 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 RALGDSQ12967 914 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 CRY2Q49AN0 593 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 FAM133BQ5BKY9 247 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 TCP11X2Q5H9J9 407 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 GCNT6Q5T4J0 391 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 EEF1A1P5Q5VTE0 462 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 KRT80Q6KB66 452 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 SPSB3Q6PJ21 355 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 IQCHQ86VS3 1027 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 ZNF595Q8IYB9 648 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 OR2AJ1Q8NGZ0 328 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 IGSF21Q96ID5 467 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 LINC00615Q96LM1 132 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 TTC14Q96N46 770 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 ZMAT2Q96NC0 199 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 OPA3Q9H6K4 179 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 HHATLQ9HCP6 504 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 OLAHQ9NV23 265 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 NPAP1Q9NZP6 1156 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 RHCGQ9UBD6 479 aa4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 DDX25Q9UHL0 483 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-205ENST00000581383 IGHV4OR15-8A0A075B7B6 117 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PRSS51A0A1B0GVH4 220 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PLSCR5A0PG75 271 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 C15orf62A8K5M9 175 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 GCNT3O95395 438 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 GM2AP17900 193 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 IL15P40933 162 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PSMC4P43686 418 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 FUT6P51993 359 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PRKAA1Q13131 559 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 CAMK2DQ13557 499 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PSMD6Q15008 389 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 STXBP5Q5T5C0 1151 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 C9orf57Q5W0N0 161 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 UNQ6126/PRO20091Q6UXV3 157 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 PLEKHM3Q6ZWE6 761 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 Q8NFD4 153 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 SORCS1Q8WY21 1168 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 ZNF653Q96CK0 615 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms