RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 STX7O15400 261 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 CBFA2T2O43439 604 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 PSTPIP1O43586 416 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 BUD23O43709 281 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 SPOPO43791 374 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 DNAJB5O75953 348 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 ZRANB2O95218 330 aaKnown RBP eCLIP10.34□□□□□ -0.756e-6■■■■□ 21
RFFL-209ENST00000581265 ZBTB11O95625 1053 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 PDGFAP04085 211 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 PYGMP11217 842 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 POU3F2P20265 443 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 LPOP22079 712 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 GNLYP22749 145 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 RPS15P62841 145 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 PDE1BQ01064 536 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 XRCC4Q13426 336 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 PLCL1Q15111 1095 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 LLGL1Q15334 1064 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 IZUMO3Q5VZ72 239 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 PAPD7Q5XG87 772 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 KAZNQ674X7 775 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 RANBP10Q6VN20 620 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 ZC3H18Q86VM9 953 aaKnown RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 RCOR2Q8IZ40 523 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 IPMKQ8NFU5 416 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 OR2L2Q8NH16 312 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 ZNF501Q96CX3 271 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 LINC00615Q96LM1 132 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 LRFN5Q96NI6 719 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 TRIM55Q9BYV6 548 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 WWP1Q9H0M0 922 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 KIR3DX1Q9H7L2 352 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 LATS2Q9NRM7 1088 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 BTRCQ9Y297 605 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 MED13Q9UHV7 2174 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 ICE1Q9Y2F5 2266 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 SPTBP11277 2137 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 hCG_1818297A0A087WSY0 165 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 OR6C74A6NCV1 312 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 C5orf60A6NFR6 353 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 C2orf81A6NN90 581 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 SGTAO43765 313 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 MFAP3LO75121 409 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 CPNE3O75131 537 aaKnown RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 SCRG1O75711 98 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 AGTP01019 485 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 KLK3P07288 261 aaPredicted RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 TPM1P09493 284 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 MSH3P20585 1137 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 COL8A1P27658 744 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 AKT1P31749 480 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 DCTP40126 519 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 GPS2Q13227 327 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 PTPRCAPQ14761 206 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 TAF1AQ15573 450 aaPredicted RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 BCL7AQ4VC05 210 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 TMTC4Q5T4D3 741 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 CAPRIN2Q6IMN6 1127 aaKnown RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 ARMC6Q6NXE6 501 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 OOSP2Q86WS3 158 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 VSTM4Q8IW00 320 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 KATNAL2Q8IYT4 538 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 SLC38A9Q8NBW4 561 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 MOCOSQ96EN8 888 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 C12orf66Q96MD2 445 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 QKIQ96PU8 341 aaKnown RBP eCLIP10.33□□□□□ -0.763e-7■■■□□ 18.5
RFFL-209ENST00000581265 C19orf43Q9BQ61 176 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 ASB8Q9H765 288 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 CFAP20Q9Y6A4 193 aaKnown RBP10.33□□□□□ -0.76
RFFL-209ENST00000581265 COLEC10Q9Y6Z7 277 aa10.33□□□□□ -0.76
RFFL-209ENST00000581265 TTLL8A6PVC2 850 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 F5H423 210 aaPredicted RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 MEN1O00255 615 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 ANXA9O76027 345 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 SRP72O76094 671 aaKnown RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 PRAMEF1O95521 474 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 RAB40ALP0C0E4 278 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 MSL3P1P0C860 447 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 NDUFS1P28331 727 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 PBLDP30039 288 aaPredicted RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 ADRA1AP35348 466 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 UQCRFS1P47985 274 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 PGDP52209 483 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 KPNA2P52292 529 aaKnown RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 GEMP55040 296 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 GSDMDP57764 484 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 RPS18P62269 152 aaKnown RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 XIAPP98170 497 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 MSLNQ13421 630 aaPredicted RBP10.32□□□□□ -0.76
RFFL-209ENST00000581265 IL10RAQ13651 578 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 GPR19Q15760 415 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 PLEKHS1Q5SXH7 462 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 BBS12Q6ZW61 710 aa10.32□□□□□ -0.76
RFFL-209ENST00000581265 DET1Q7L5Y6 550 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms