RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CA9Q16790 459 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 KLHL10Q6JEL2 608 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 KIRREL2Q6UWL6 708 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 FAM83HQ6ZRV2 1179 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 STRADAQ7RTN6 431 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 LRRTM4Q86VH4 590 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 NLRP8Q86W28 1048 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 OOSP2Q86WS3 158 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 SIRT6Q8N6T7 355 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 CENPIQ92674 756 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 DPH2Q9BQC3 489 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 POLDIP3Q9BY77 421 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 FAM83DQ9H4H8 585 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 TMEM51Q9NW97 253 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 PPT2Q9UMR5 302 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 FHOD1Q9Y613 1164 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 HS3ST3B1Q9Y662 390 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 A0A0J9YYE9 177 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 KMOO15229 486 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 FGF10O15520 208 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 CCP110O43303 1012 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 PRAMEF2O60811 474 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 TRBC1P01850 177 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 SLC4A1P02730 911 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 CYP11B1P15538 503 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 PTPN9P43378 593 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 RENBPP51606 427 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 EPHB1P54762 984 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 SNTB1Q13884 538 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 CES4AQ5XG92 561 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 CDHR3Q6ZTQ4 885 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 DMRTC2Q8IXT2 367 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 CEP63Q96MT8 703 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 C11orf70Q9BRQ4 267 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 ZFYVE1Q9HBF4 777 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 SLC22A11Q9NSA0 550 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 SERTAD3Q9UJW9 196 aa13.59□□□□□ -0.23
CSNK1D-213ENST00000580446 C1orf232A0A0U1RR37 186 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 C17orf113A0A1B0GUU1 675 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 A0A1W2PQ67 120 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 DYTNA2CJ06 578 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 GSAPA4D1B5 854 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ADAM10O14672 748 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 CHUKO15111 745 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 PEX11BO96011 259 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 CRYABP02511 175 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 MMEP08473 750 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ZNF30P17039 623 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 HALP42357 657 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 SPINT3P49223 89 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 DCDP81605 110 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 RFTN1Q14699 578 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 INAQ16352 499 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 NKAIN1Q4KMZ8 207 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 MRPL14Q6P1L8 145 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 CEP128Q6ZU80 1094 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 CIARTQ8N365 385 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 TAB3Q8N5C8 712 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 GPATCH1Q9BRR8 931 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 TIMM29Q9BSF4 260 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 SPATA16Q9BXB7 569 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 SOX17Q9H6I2 414 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ZNF160Q9HCG1 818 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 DNAJC12Q9UKB3 198 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 CHKBQ9Y259 395 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 ZNF835Q9Y2P0 537 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 PPIL1Q9Y3C6 166 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 DOCK10Q96BY6 2186 aa13.58□□□□□ -0.24
CSNK1D-213ENST00000580446 FZD6O60353 706 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 CELA2AP08217 269 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 PYGMP11217 842 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 MMP11P24347 488 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 PBLDP30039 288 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 NOMO3P69849 1222 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 TFF3Q07654 80 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 PCOLCEQ15113 449 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 ARCQ7LC44 396 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 C11orf96Q7Z7L8 435 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 TRAPPC5Q8IUR0 188 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 ZNF655Q8N720 491 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 ACRBPQ8NEB7 543 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 OR4E2Q8NGC2 313 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 BRIX1Q8TDN6 353 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 RMND5BQ96G75 393 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms