RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CCNYQ8ND76 341 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GPR150Q8NGU9 434 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HDAC11Q96DB2 347 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TRIB3Q96RU7 358 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ISCUQ9H1K1 167 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HAUS4Q9H6D7 363 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 C1GALT1Q9NS00 363 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 IMP3Q9NV31 184 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PCMTD2Q9NV79 361 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PSMD13Q9UNM6 376 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FER1L5A0AVI2 2057 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MYO7BQ6PIF6 2116 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PCNX1Q96RV3 2341 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ARHGAP10A1A4S6 786 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OR6C74A6NCV1 312 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 F5H423 210 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 POP7O75817 140 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC4A1P02730 911 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PYGMP11217 842 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CDH3P22223 829 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NDUFS1P28331 727 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HMGCLP35914 325 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PRKCIP41743 596 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SOX8P57073 446 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MYL5Q02045 173 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DPYSL3Q14195 570 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ATP13A5Q4VNC0 1218 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KHDC1Q4VXA5 237 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AGAP3Q96P47 875 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TLR10Q9BXR5 811 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF552Q9H707 407 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KIR3DX1Q9H7L2 352 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AIPL1Q9NZN9 384 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC24A2Q9UI40 661 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 COLEC10Q9Y6Z7 277 aa11.88□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MED13LQ71F56 2210 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 A0A1B0GUH1 482 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TMEM150CB9EJG8 249 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 E7EQ34 232 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MYO1FO00160 1098 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DDX3XO00571 662 aaKnown RBP eCLIP11.87□□□□□ -0.511e-8■■■□□ 15.4
CDK5RAP3-216ENST00000579853 KRT38O76015 456 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CD48P09326 243 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PIRTP0C851 137 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 EDN3P14138 238 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PRF1P14222 555 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HLA-DPA1P20036 260 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GRNP28799 593 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OTX2P32243 289 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SSR1P43307 286 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PREPP48147 710 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 IFI35P80217 286 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ABRQ12979 859 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LONRF2Q1L5Z9 754 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZXDCQ2QGD7 858 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TMEM220Q6QAJ8 160 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NT5DC3Q86UY8 548 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GPR135Q8IZ08 494 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NACC2Q96BF6 587 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 IMP4Q96G21 291 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 UNKQ9C0B0 810 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ANAPC7Q9UJX3 599 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 POMT2Q9UKY4 750 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TMPRSS11EQ9UL52 423 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HEBP2Q9Y5Z4 205 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CROCCQ5TZA2 2017 aa11.87□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC9B1P1A6NJY1 282 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KCNK1O00180 336 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NDST3O95803 873 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FOLR3P41439 243 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ARSEP51690 589 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PPIDQ08752 370 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ITGA9Q13797 1035 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LLGL1Q15334 1064 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PTCHD3Q3KNS1 767 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZC3H18Q86VM9 953 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KCNMB4Q86W47 210 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CNTD1Q8N815 330 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms