RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 C17orf113A0A1B0GUU1 675 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 LIN7AO14910 233 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 S100BP04271 92 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 ENO2P09104 434 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 IGFALSP35858 605 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 MAPK9P45984 424 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 GALNT1Q10472 559 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 SF3A3Q12874 501 aaKnown RBP eCLIP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 PRKAA1Q13131 559 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 ARL13AQ5H913 290 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 FRMD7Q6ZUT3 714 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 SPATS2Q86XZ4 545 aaKnown RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 THOC1Q96FV9 657 aaKnown RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 ILKAPQ9H0C8 392 aaPredicted RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 RDH14Q9HBH5 336 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 EML4Q9HC35 981 aaKnown RBP18.21■□□□□ 0.51
PRKCA-203ENST00000578063 HAO1Q9UJM8 370 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 PIKFYVEQ9Y2I7 2098 aa18.21■□□□□ 0.51
PRKCA-203ENST00000578063 SLC5A10A0PJK1 596 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 CHUKO15111 745 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SLC16A5O15375 505 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SEMA4FO95754 770 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 VCLP18206 1134 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 OXTRP30559 389 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 CCR3P51677 355 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 HK2P52789 917 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 HK3P52790 923 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 PLOD1Q02809 727 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 DOK6Q6PKX4 331 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 PDPRQ8NCN5 879 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SKA2Q8WVK7 121 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 C10orf82Q8WW14 230 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 LGR4Q9BXB1 951 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 C1QTNF3Q9BXJ4 246 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 MARCOQ9UEW3 520 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 ADAMTS6Q9UKP5 1117 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 TMEM98Q9Y2Y6 226 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 OR1A2Q9Y585 309 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 TMEM202A6NGA9 273 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 NCF1BA6NI72 391 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 NCF1CA8MVU1 366 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SLC31A1O15431 190 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 FFAR2O15552 330 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SUPT7LO94864 414 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 CHRNGP07510 517 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 NCF1P14598 390 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 SETDB1Q15047 1291 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 ZNF658BQ4V348 819 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 ATG14Q6ZNE5 492 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 LRRTM4Q86VH4 590 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 VRK3Q8IV63 474 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 ZNF547Q8IVP9 402 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 KIRREL3Q8IZU9 778 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 RFWD2Q8NHY2 731 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 HM13Q8TCT9 377 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 FOXJ1Q92949 421 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 HHIPQ96QV1 700 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 CHRDQ9H2X0 955 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 GSTO2Q9H4Y5 243 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 KCNK4Q9NYG8 393 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 UTP6Q9NYH9 597 aaKnown RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 DCTN4Q9UJW0 460 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 DNMT3AQ9Y6K1 912 aaPredicted RBP18.2■□□□□ 0.5
PRKCA-203ENST00000578063 USH1CQ9Y6N9 552 aa18.2■□□□□ 0.5
PRKCA-203ENST00000578063 KLHL33A6NCF5 533 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 ERICH4A6NGS2 130 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 C10orf142B7Z368 130 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 CACNB4O00305 520 aaPredicted RBP18.19■□□□□ 0.5
PRKCA-203ENST00000578063 STK25O00506 426 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 ZNF217O75362 1048 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 RPS17P08708 135 aaKnown RBP18.19■□□□□ 0.5
PRKCA-203ENST00000578063 KITP10721 976 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 PBLDP30039 288 aaPredicted RBP18.19■□□□□ 0.5
PRKCA-203ENST00000578063 UNC50Q53HI1 259 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 CDKL4Q5MAI5 379 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 CRTC3Q6UUV7 619 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 SLC22A15Q8IZD6 547 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 LSMEM2Q8N112 164 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 ZNF781Q8N8C0 355 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 PJA1Q8NG27 643 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 OR2L2Q8NH16 312 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 ASB11Q8WXH4 323 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 CLDN23Q96B33 292 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 MOCOSQ96EN8 888 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 SLC12A9Q9BXP2 914 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 TRIM54Q9BYV2 358 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 COG4Q9H9E3 785 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 ACSS2Q9NR19 701 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 C2orf42Q9NWW7 574 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 FAM8A1Q9UBU6 413 aa18.19■□□□□ 0.5
PRKCA-203ENST00000578063 TNPO3Q9Y5L0 923 aaKnown RBP18.19■□□□□ 0.5
PRKCA-203ENST00000578063 A0A0G2JND7 137 aa18.18■□□□□ 0.5
PRKCA-203ENST00000578063 PABPN1LA6NDY0 278 aaKnown RBP18.18■□□□□ 0.5
PRKCA-203ENST00000578063 MGAT4DA6NG13 374 aa18.18■□□□□ 0.5
PRKCA-203ENST00000578063 LATO43561 262 aa18.18■□□□□ 0.5
PRKCA-203ENST00000578063 POP7O75817 140 aaKnown RBP18.18■□□□□ 0.5
PRKCA-203ENST00000578063 SIX3O95343 332 aaPredicted RBP18.18■□□□□ 0.5
PRKCA-203ENST00000578063 HOXC4P09017 264 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms