RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SYTL2Q9HCH5 934 aa13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 ETNK2Q9NVF9 386 aa13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 SERTAD3Q9UJW9 196 aa13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 RPL26L1Q9UNX3 145 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 NEU2Q9Y3R4 380 aa13.71□□□□□ -0.21
PPP4R1-206ENST00000577779 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 NUP210LQ5VU65 1888 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 CCDC78A2IDD5 438 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 E7EQ34 232 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 C19orf84I3L1E1 186 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 ZNF749O43361 778 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 FAM155BO75949 473 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 CDH3P22223 829 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 AMPD1P23109 780 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 CES1P23141 567 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 SOX5P35711 763 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 PBX1P40424 430 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TDGF1P3P51864 188 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 ART1P52961 327 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 ZNF385CQ66K41 422 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 ZNF324BQ6AW86 544 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TMEM207Q6UWW9 146 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 C11orf96Q7Z7L8 435 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 CEP97Q8IW35 865 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TRAM1L1Q8N609 369 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 OR2Y1Q8NGV0 311 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 SH3BGRL2Q9UJC5 107 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 TTLL3Q9Y4R7 772 aa13.7□□□□□ -0.22
PPP4R1-206ENST00000577779 H3BRJ5 948 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 AGPSO00116 658 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 MAP3K7O43318 606 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 CD63P08962 238 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 GALNT3Q14435 633 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 SYCP1Q15431 976 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 QPCTQ16769 361 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 KHDC1Q4VXA5 237 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 RPUSD3Q6P087 351 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 CYP4V2Q6ZWL3 525 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 NR4A3Q92570 626 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 PTERQ96BW5 349 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 ZNF653Q96CK0 615 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 NDOR1Q9UHB4 597 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 FBXL4Q9UKA2 621 aa13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 CFAP20Q9Y6A4 193 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-206ENST00000577779 CCDC66A2RUB6 948 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 ALOX12BO75342 701 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 RNF8O76064 485 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 SLC4A1P02730 911 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 MSL3P1P0C860 447 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 CBSLP0DN79 551 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 POLR2CP19387 275 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 MIPP30301 263 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 CBSP35520 551 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 ARL4AP40617 200 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 CA7P43166 264 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 KIR3DL1P43629 444 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 FOXL2P58012 376 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 DCDC1P59894 354 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 Q0VFX4 171 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 PRKAA1Q13131 559 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 XRCC4Q13426 336 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 GTF2H3Q13889 308 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 C1orf189Q5VU69 101 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 OR1N1Q8NGS0 311 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 EID2BQ96D98 161 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 MTFMTQ96DP5 389 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 GANQ9H2C0 597 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 ZFYVE1Q9HBF4 777 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 SLC6A20Q9NP91 592 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 C1GALT1Q9NS00 363 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 POMT2Q9UKY4 750 aa13.68□□□□□ -0.22
PPP4R1-206ENST00000577779 ABCA4P78363 2273 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 STAB1Q9NY15 2570 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 ANKRD66B4E2M5 251 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 KCNJ13O60928 360 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 UNC5CO95185 931 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 UMODP07911 640 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 HLA-DPA1P20036 260 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 SERPINB6P35237 376 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 LMAN1P49257 510 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 SMSP52788 366 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 JAM2P57087 298 aa13.67□□□□□ -0.22
PPP4R1-206ENST00000577779 POLR2FP61218 127 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms