RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CDKN2AIPNLQ96HQ2 116 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MAELQ96JY0 434 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 C1orf74Q96LT6 269 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 GPR21Q99679 349 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 TAS2R13Q9NYV9 303 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SUN2Q9UH99 717 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DNAJC15Q9Y5T4 150 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DNAH12Q6ZR08 3092 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ZSWIM8A7E2V4 1837 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 A0A1B0GTW7 788 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 NPEPPSL1A6NEC2 478 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 STX7O15400 261 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 PAPSS2O95340 614 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 ALDOCP09972 364 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 CYBAP13498 195 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CD1DP15813 335 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ZNF37AP17032 561 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 ITGB6P18564 788 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CD247P20963 164 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CTGFP29279 349 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 GATMP50440 423 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DIO3P55073 304 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 KCNK10P57789 538 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MYBPC1Q00872 1141 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PRKCZQ05513 592 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CLLU1OSQ5K130 101 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SEZ6L2Q6UXD5 910 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SLC24A5Q71RS6 500 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DENND1CQ8IV53 801 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 SCML4Q8N228 414 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PELI3Q8N2H9 469 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ZNF786Q8N393 782 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 HMGCLL1Q8TB92 370 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 STAG3L4Q8TBR4 150 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 UBASH3BQ8TF42 649 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CYGBQ8WWM9 190 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DGCR14Q96DF8 476 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 RPL10LQ96L21 214 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 GLT1D1Q96MS3 346 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ACOX2Q99424 681 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SLC29A1Q99808 456 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 GPR62Q9BZJ7 368 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SYTL2Q9HCH5 934 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ATP13A1Q9HD20 1204 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PRDM5Q9NQX1 630 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 MRGBPQ9NV56 204 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
VAPA-203ENST00000577539 GID8Q9NWU2 228 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 NDUFA13Q9P0J0 144 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 UBA2Q9UBT2 640 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 TRMT6Q9UJA5 497 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 VPS28Q9UK41 221 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CNOT6Q9ULM6 557 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 COMMD3-BMI1R4GMX3 469 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CENPFP49454 3210 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 SBF1O95248 1867 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 C2orf81A6NN90 581 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 PDLIM1O00151 329 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 DENRO43583 198 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 NDST3O95803 873 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 TFAP2AP05549 437 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 CKMP06732 381 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 HSPA1AP0DMV8 641 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 HSPA1BP0DMV9 641 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 AGTR2P50052 363 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 CSRP3P50461 194 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 PTPRRQ15256 657 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 PARP15Q460N3 678 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 RGMBQ6NW40 437 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 LINGO4Q6UY18 593 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 CDYL2Q8N8U2 506 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 BRSK1Q8TDC3 778 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 NUDT8Q8WV74 236 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 FUBP3Q96I24 572 aaKnown RBP eCLIP5.29□□□□□ -1.56
VAPA-203ENST00000577539 SEPHS2Q99611 448 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 HGH1Q9BTY7 390 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 ABT1Q9ULW3 272 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 SPO11Q9Y5K1 396 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 RALGAPA2Q2PPJ7 1873 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 A0A1B0GVC2 190 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 DHRS12A0PJE2 317 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 C7orf72A4D263 438 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 NIPSNAP2O75323 286 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 VPS26AO75436 327 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 RTN3O95197 1032 aaPredicted RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 ALDH2P05091 517 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 PYGLP06737 847 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 RHOCP08134 193 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 MTHFD1P11586 935 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 NCK1P16333 377 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 RPL17P18621 184 aaKnown RBP5.29□□□□□ -1.56
VAPA-203ENST00000577539 CAPN3P20807 821 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 ATP6V1B2P21281 511 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 SLC7A1P30825 629 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 CDH15P55291 814 aa5.29□□□□□ -1.56
VAPA-203ENST00000577539 YBEYP58557 167 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms