RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GUCA1BQ9UMX6 200 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 IGHV5-51A0A0C4DH38 117 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 C17orf113A0A1B0GUU1 675 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 POLR1CO15160 346 aaPredicted RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 FGF5P12034 268 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 ATP1B2P14415 290 aaPredicted RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 ITGB6P18564 788 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 NELFEP18615 380 aaKnown RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 STIP1P31948 543 aaKnown RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 GRIA1P42261 906 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 SEPHS1P49903 392 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 GSDMDP57764 484 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 DBN1Q16643 649 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 FAM92BQ6ZTR7 304 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 NLGN4XQ8N0W4 816 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 NLGN4YQ8NFZ3 816 aaPredicted RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 OR13J1Q8NGT2 312 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 HM13Q8TCT9 377 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 ZFPM2Q8WW38 1151 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 C1orf54Q8WWF1 131 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 ZDHHC12Q96GR4 267 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 FRMD8P1Q9BZ68 369 aaPredicted RBP17.01■□□□□ 0.31
SMG6-214ENST00000573827 OR52A5Q9H2C5 316 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 KIR3DX1Q9H7L2 352 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 ETNK1Q9HBU6 452 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 WDR70Q9NW82 654 aa17.01■□□□□ 0.31
SMG6-214ENST00000573827 OR5K3A6NET4 321 aa17■□□□□ 0.31
SMG6-214ENST00000573827 PLA2G2AP14555 144 aa17■□□□□ 0.31
SMG6-214ENST00000573827 ETS1P14921 441 aa17■□□□□ 0.31
SMG6-214ENST00000573827 MAP4P27816 1152 aaKnown RBP17■□□□□ 0.31
SMG6-214ENST00000573827 FOXN2P32314 431 aa17■□□□□ 0.31
SMG6-214ENST00000573827 SEMA5AQ13591 1074 aa17■□□□□ 0.31
SMG6-214ENST00000573827 MAP7Q14244 749 aa17■□□□□ 0.31
SMG6-214ENST00000573827 CACHD1Q5VU97 1274 aa17■□□□□ 0.31
SMG6-214ENST00000573827 IRGCQ6NXR0 463 aa17■□□□□ 0.31
SMG6-214ENST00000573827 CERS6Q6ZMG9 384 aa17■□□□□ 0.31
SMG6-214ENST00000573827 CFAP206Q8IYR0 622 aa17■□□□□ 0.31
SMG6-214ENST00000573827 UNC5BQ8IZJ1 945 aa17■□□□□ 0.31
SMG6-214ENST00000573827 CLDN19Q8N6F1 224 aa17■□□□□ 0.31
SMG6-214ENST00000573827 IL22RA1Q8N6P7 574 aa17■□□□□ 0.31
SMG6-214ENST00000573827 OR52K1Q8NGK4 314 aa17■□□□□ 0.31
SMG6-214ENST00000573827 STYXQ8WUJ0 223 aa17■□□□□ 0.31
SMG6-214ENST00000573827 HEXDCQ8WVB3 486 aa17■□□□□ 0.31
SMG6-214ENST00000573827 SLC45A3Q96JT2 553 aa17■□□□□ 0.31
SMG6-214ENST00000573827 C12orf66Q96MD2 445 aa17■□□□□ 0.31
SMG6-214ENST00000573827 NRTNQ99748 197 aa17■□□□□ 0.31
SMG6-214ENST00000573827 COG4Q9H9E3 785 aa17■□□□□ 0.31
SMG6-214ENST00000573827 IL17BQ9UHF5 180 aa17■□□□□ 0.31
SMG6-214ENST00000573827 PRSS21Q9Y6M0 314 aa17■□□□□ 0.31
SMG6-214ENST00000573827 PRRC2CQ9Y520 2896 aaKnown RBP16.99■□□□□ 0.31
SMG6-214ENST00000573827 ERI2A8K979 691 aaKnown RBP16.99■□□□□ 0.31
SMG6-214ENST00000573827 PSMD3O43242 534 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 KRT86O43790 486 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 TIAF1O95411 115 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
SMG6-214ENST00000573827 POLBP06746 335 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 FOLR1P15328 257 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 F8A1P23610 371 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 STAT5AP42229 794 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 CCZ1BP86790 482 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 CCZ1P86791 482 aaPredicted RBP16.99■□□□□ 0.31
SMG6-214ENST00000573827 ACVR1Q04771 509 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 CACNG1Q06432 222 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 ABHD18Q0P651 414 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 IL11RAQ14626 422 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 UBXN4Q92575 508 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 DCUN1D1Q96GG9 259 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 OR6C1Q96RD1 312 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 MAP3K3Q99759 626 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 FAM8A1Q9UBU6 413 aa16.99■□□□□ 0.31
SMG6-214ENST00000573827 CCDC162PA2VCL2 907 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 OR51F1A6NGY5 319 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 CFAP99D6REC4 459 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 NKX2-8O15522 239 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RASSF9O75901 435 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 SLC35G4P0C7Q5 338 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 FAM87AP0C7U9 286 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RALBP11234 206 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 PDHA2P29803 388 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 FOXM1Q08050 763 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 SEPT6Q14141 434 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RPS6KA1Q15418 735 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMG6-214ENST00000573827 CCDC38Q502W7 563 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 SEL1L2Q5TEA6 688 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 DRICH1Q6PGQ1 229 aaPredicted RBP16.98■□□□□ 0.31
SMG6-214ENST00000573827 ZNF534Q76KX8 674 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 LINC00523Q86TU6 105 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RNF31Q96EP0 1072 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 PPM1MQ96MI6 270 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 ZNF778Q96MU6 729 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RANBP9Q96S59 729 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 CCM2Q9BSQ5 444 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 CASS4Q9NQ75 786 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 STARD5Q9NSY2 213 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 HRASLS2Q9NWW9 162 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 SLC2A6Q9UGQ3 507 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms