RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 FBXO25Q8TCJ0 367 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 HM13Q8TCT9 377 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 PYROXD1Q8WU10 500 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 CFAP36Q96G28 342 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 PWWP2AQ96N64 755 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
RPAIN-213ENST00000573577 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 LRRN3Q9H3W5 708 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 WASH6PQ9NQA3 447 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 INTS10Q9NVR2 710 aaKnown RBP13.28□□□□□ -0.28
RPAIN-213ENST00000573577 MARCH4Q9P2E8 410 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-213ENST00000573577 MTRF1LQ9UGC7 380 aaKnown RBP13.28□□□□□ -0.28
RPAIN-213ENST00000573577 SLC23A2Q9UGH3 650 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 GNPTGQ9UJJ9 305 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 ACSL5Q9ULC5 683 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
RPAIN-213ENST00000573577 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.28
RPAIN-213ENST00000573577 UBA6A0AVT1 1052 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 ESYT3A0FGR9 886 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 A6NCN8 305 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 H3BMM5 538 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 SGTAO43765 313 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 OR1I1O60431 355 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 ADARP55265 1226 aaKnown RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 FRG1Q14331 258 aaKnown RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 SEMA3AQ14563 771 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 AGAP9Q5VTM2 703 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 IYDQ6PHW0 289 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 LDB1Q86U70 411 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 IGDCC3Q8IVU1 814 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 PALM2Q8IXS6 379 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 GSDMBQ8TAX9 411 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 SLC37A2Q8TED4 501 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 ATXN7L3BQ96GX2 97 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 SAYSD1Q9NPB0 183 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.29
RPAIN-213ENST00000573577 ENTPD2Q9Y5L3 495 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 RP1P56715 2156 aa13.27□□□□□ -0.29
RPAIN-213ENST00000573577 TRBV23OR9-2A0A075B6M9 112 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 PRR19A6NJB7 356 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 TAF4O00268 1085 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 LIN7AO14910 233 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-213ENST00000573577 PPM1DO15297 605 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 BRINP1O60477 761 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ESR1P03372 595 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 MPOP05164 745 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ALDH4A1P30038 563 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 GPR3P46089 330 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 FASLGP48023 281 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 OR1D5P58170 312 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 RPA4Q13156 261 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 CUL1Q13616 776 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 SEPT7Q16181 437 aaKnown RBP13.26□□□□□ -0.29
RPAIN-213ENST00000573577 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 PTRHD1Q6GMV3 140 aaKnown RBP13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ANKMY2Q8IV38 441 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 IFT20Q8IY31 132 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 CFAP206Q8IYR0 622 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 CERS2Q96G23 380 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 ARHGEF17Q96PE2 2063 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-213ENST00000573577 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 POLR1BQ9H9Y6 1135 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 IL1RAPL1Q9NZN1 696 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
RPAIN-213ENST00000573577 KMT2BQ9UMN6 2715 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SRRM3A6NNA2 597 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 KPNA5O15131 536 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 B4GAT1O43505 415 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 GSTA2P09210 222 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SLC35G4P0C7Q5 338 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 RPL10P27635 214 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SLC1A2P43004 574 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 LSSP48449 732 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms