RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 LIMK2P53671 638 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 TLE3Q04726 772 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 GABPB1Q06547 395 aaPredicted RBP8.92□□□□□ -0.98
NDE1-207ENST00000573203 CBLBQ13191 982 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 SQSTM1Q13501 440 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 TRA2AQ13595 282 aaKnown RBP eCLIP8.92□□□□□ -0.98
NDE1-207ENST00000573203 PTK6Q13882 451 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 SEPT6Q14141 434 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 C16orf72Q14CZ0 275 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 KCTD11Q693B1 232 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 DENND5AQ6IQ26 1287 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 TMEM71Q6P5X7 295 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 TMEM220Q6QAJ8 160 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ZNF574Q6ZN55 896 aaPredicted RBP8.92□□□□□ -0.98
NDE1-207ENST00000573203 CEP128Q6ZU80 1094 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 AMZ2Q86W34 360 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 KLHDC8BQ8IXV7 354 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 CCDC89Q8N998 374 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 RCBTB1Q8NDN9 531 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 C1orf54Q8WWF1 131 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 NCSTNQ92542 709 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ART4Q93070 314 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 CXorf40BQ96DE9 158 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 SH3GL2Q99962 352 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 TXLNGYQ9BZA5 131 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ASB8Q9H765 288 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 SMOXQ9NWM0 555 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 GRHL1Q9NZI5 618 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
NDE1-207ENST00000573203 CRLS1Q9UJA2 301 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ZNF148Q9UQR1 794 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 PCDHGA7Q9Y5G6 932 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ZFHX4Q86UP3 3567 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 ZFYVE26Q68DK2 2539 aa8.92□□□□□ -0.98
NDE1-207ENST00000573203 LILRA5A6NI73 299 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 OR2AG2A6NM03 316 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 E7EVH7 732 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 AGPSO00116 658 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 HGSO14964 777 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 NVLO15381 856 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 KCNJ13O60928 360 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 POP7O75817 140 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 AP2A1O95782 977 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 FAM153BP0C7A2 387 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 THRAP10827 490 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 RALBP11234 206 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 TPH1P17752 444 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 XRCC1P18887 633 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 ITGALP20701 1170 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 PBLDP30039 288 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 CSTF2P33240 577 aaKnown RBP eCLIP8.91□□□□□ -0.98
NDE1-207ENST00000573203 FDFT1P37268 417 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 HALP42357 657 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 LMAN1P49257 510 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 ZNF140P52738 457 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 CTSCP53634 463 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 EPHA4P54764 986 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 UCNP55089 124 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 EIF3BP55884 814 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 UBE2IP63279 158 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 XIAPP98170 497 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 CFHR1Q03591 330 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 MSLNQ13421 630 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 SNX1Q13596 522 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 POU6F1Q14863 301 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 SLMAPQ14BN4 828 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 TRADDQ15628 312 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 OASLQ15646 514 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 TUBB8Q3ZCM7 444 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 FAM153CQ494X1 144 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 SNAP47Q5SQN1 464 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 FNBP1LQ5T0N5 605 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 TMEM164Q5U3C3 297 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 AGAP9Q5VTM2 703 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 WDR74Q6RFH5 385 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 ABRAXAS1Q6UWZ7 409 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 WASH2PQ6VEQ5 465 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 DET1Q7L5Y6 550 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 C11orf96Q7Z7L8 435 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 CROCCP2Q86T23 111 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 LINC00523Q86TU6 105 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 RELL1Q8IUW5 271 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 GOLGA6L1Q8N7Z2 621 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 DNAAF3Q8N9W5 541 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 AGBL5Q8NDL9 886 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 USP7Q93009 1102 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 ULK4Q96C45 1275 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 RTP4Q96DX8 246 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 DCUN1D1Q96GG9 259 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 ZNF514Q96K75 400 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 FMO2Q99518 471 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 C19orf43Q9BQ61 176 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 TBC1D10AQ9BXI6 508 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 EPB41L1Q9H4G0 881 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 WASH6PQ9NQA3 447 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 POT1Q9NUX5 634 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 PIH1D1Q9NWS0 290 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 TMEM9Q9P0T7 183 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms