RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TRIB3Q96RU7 358 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 MBOAT4Q96T53 435 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 IKZF5Q9H5V7 419 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 MARCH2Q9P0N8 246 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 BAG5Q9UL15 447 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 BLOC1S6Q9UL45 172 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 COMMD10Q9Y6G5 202 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 AXIN1O15169 862 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 B4GALT3O60512 393 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 NPPAP01160 153 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 HTR1BP28222 390 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 PIK3CGP48736 1102 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 PTGR1Q14914 329 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 DPY19L1Q2PZI1 675 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 ATAD1Q8NBU5 361 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 ZNF555Q8NEP9 628 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 HDAC2Q92769 488 aaKnown RBP17.21■□□□□ 0.35
SCARF1-205ENST00000571272 ADAM2Q99965 735 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 FKBPLQ9UIM3 349 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 U3KQV3 271 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 TMEM221A6NGB7 291 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 C16orf96A6NNT2 1141 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 INMTO95050 263 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 RAD23AP54725 363 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 PWP1Q13610 501 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 ZRANB3Q5FWF4 1079 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 CTSL3PQ5NE16 218 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 SNX29P2Q8IUI4 249 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 EFHBQ8N7U6 833 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 FKBP10Q96AY3 582 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 AURKBQ96GD4 344 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-205ENST00000571272 ZNF382Q96SR6 550 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-205ENST00000571272 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
SCARF1-205ENST00000571272 E5RI56 91 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 ABRAXAS2Q15018 415 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 GNASQ5JWF2 1037 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 PERM1Q5SV97 790 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 OR4F6Q8NGB9 312 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 FRS2Q8WU20 508 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 ITCHQ96J02 903 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 PALMDQ9NP74 551 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 ST14Q9Y5Y6 855 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 LSM1O15116 133 aaKnown RBP17.2■□□□□ 0.34
SCARF1-205ENST00000571272 HS6ST1O60243 411 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 SLC2A4P14672 509 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 MC4RP32245 332 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 THPOP40225 353 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 TRIM16LQ309B1 348 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 NIPAL1Q6NVV3 410 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 LPCAT1Q8NF37 534 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 OR10Q1Q8NGQ4 319 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 MAGED4Q96JG8 741 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
SCARF1-205ENST00000571272 OSBPL10Q9BXB5 764 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 UGT2B28Q9BY64 529 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 FBXO44Q9H4M3 255 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 HEBP1Q9NRV9 189 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 DNAJB9Q9UBS3 223 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
SCARF1-205ENST00000571272 C2orf81A6NN90 581 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 PRKD3O94806 890 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 NADSYN1Q6IA69 706 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 LAIR2Q6ISS4 152 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SLC16A12Q6ZSM3 486 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SLC47A1Q96FL8 570 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ACTR8Q9H981 624 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SH3BP1Q9Y3L3 701 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 TDRD15B5MCY1 1934 aaKnown RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ANKRD36A6QL64 1941 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ARNTLO00327 626 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ANKRD28O15084 1053 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ARPP19P56211 112 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 RPL38P63173 70 aaKnown RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ILF2Q12905 390 aaKnown RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 TRIP4Q15650 581 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 TMEM179BQ7Z7N9 219 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 ZNF280BQ86YH2 543 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 PARP8Q8N3A8 854 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 FAM162AQ96A26 154 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SH3YL1Q96HL8 342 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 TDRD1Q9BXT4 1180 aaKnown RBP17.19■□□□□ 0.34
SCARF1-205ENST00000571272 PDFQ9HBH1 243 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 DAPK2Q9UIK4 370 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 SNX5Q9Y5X3 404 aa17.19■□□□□ 0.34
SCARF1-205ENST00000571272 A0A0U1RQF3 1178 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 XPNPEP2O43895 674 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 E2F6O75461 281 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 FSHRP23945 695 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 YBEYP58557 167 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 LSM3P62310 102 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms