RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CD58P19256 250 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GTF2H1P32780 548 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GGT5P36269 586 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CHRNA7P36544 502 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SPAM1P38567 509 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ALDH3B1P43353 468 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ASPAP45381 313 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PHKA2P46019 1235 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 NRIP1P48552 1158 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MARCKSL1P49006 195 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SLC11A2P49281 568 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CCT3P49368 545 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 PCYT1AP49585 367 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 RGS19P49795 217 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 RNF144AP50876 292 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 EFNA5P52803 228 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PNLIPRP1P54315 467 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 EIF3BP55884 814 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 NME5P56597 212 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SRSF11Q05519 484 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 SOX4Q06945 474 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 FADDQ13158 208 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TUBB3Q13509 450 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DYRK1AQ13627 763 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SNTB1Q13884 538 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 RFTN1Q14699 578 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 FAM187BQ17R55 369 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DEFB115Q30KQ5 88 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MSS51Q4VC12 460 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GLE1Q53GS7 698 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 KLHL26Q53HC5 615 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SGO1Q5FBB7 561 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 FAM76BQ5HYJ3 339 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 EFHC2Q5JST6 749 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GNASQ5JWF2 1037 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CLVS2Q5SYC1 327 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SLC35F1Q5T1Q4 408 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ADGRF1Q5T601 910 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ARMC12Q5T9G4 340 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DCAF12L1Q5VU92 463 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PAPD7Q5XG87 772 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 CLEC6AQ6EIG7 209 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CTRB2Q6GPI1 263 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ANO7Q6IWH7 933 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 H2AFVQ71UI9 128 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 OVCH1Q7RTY7 1134 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 LRRC70Q7Z2Q7 622 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 KANSL1Q7Z3B3 1105 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SYVN1Q86TM6 617 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 AMZ2Q86W34 360 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 FAM228AQ86W67 206 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SLC15A3Q8IY34 581 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GSPT2Q8IYD1 628 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 CADM3Q8N126 398 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GALNT4Q8N4A0 578 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 LRRC57Q8N9N7 239 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SPATA4Q8NEY3 305 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 STEAP2Q8NFT2 490 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PHOSPHO2Q8TCD6 241 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CSGALNACT1Q8TDX6 532 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 LIPHQ8WWY8 451 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SOCS4Q8WXH5 440 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CPA5Q8WXQ8 436 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TFAP2BQ92481 460 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SEC14L1Q92503 715 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PIGKQ92643 395 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 HPS1Q92902 700 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 FOXJ1Q92949 421 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 C18orf25Q96B23 403 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 TMEM186Q96B77 213 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 RASD2Q96D21 266 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MED30Q96HR3 178 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SNX22Q96L94 193 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ANKRD27Q96NW4 1050 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TRAPPC9Q96Q05 1148 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 OSBPL9Q96SU4 736 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PNKPQ96T60 521 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GDF15Q99988 308 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MGME1Q9BQP7 344 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 JPH2Q9BR39 696 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 PIMREGQ9BSJ6 248 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SF3B5Q9BWJ5 86 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 CACNG6Q9BXT2 260 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TRIM31Q9BZY9 425 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PKIBQ9C010 78 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DCLK3Q9C098 648 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SLC6A16Q9GZN6 736 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 HDHD2Q9H0R4 259 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 XYLT2Q9H1B5 865 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 UPF3AQ9H1J1 476 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 MS4A5Q9H3V2 200 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ZNF576Q9H609 170 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ANKZF1Q9H8Y5 726 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 RPF1Q9H9Y2 349 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 POLR1BQ9H9Y6 1135 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 IL21RQ9HBE5 538 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GOLGA2P5Q9HBQ8 144 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 RAB6BQ9NRW1 208 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TMEM140Q9NV12 185 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DNAJC11Q9NVH1 559 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms