RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C19orf43Q9BQ61 176 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 EFHD1Q9BUP0 239 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 ULBP3Q9BZM4 244 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 TRIT1Q9H3H1 467 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 GPN2Q9H9Y4 310 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 TMEM184BQ9Y519 407 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 CAPN6Q9Y6Q1 641 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZFC3H1O60293 1989 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF891A8MT65 544 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 FAM87AP0C7U9 286 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 XIAPP98170 497 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 KLF1Q13351 362 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 SEPT6Q14141 434 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 TBR1Q16650 682 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 LINC00303Q3SY05 128 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 METRNLQ641Q3 311 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 DENND5AQ6IQ26 1287 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 CYB5D1Q6P9G0 228 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 SNX20Q7Z614 316 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 KLHDC8BQ8IXV7 354 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 ESX1Q8N693 406 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR2L2Q8NH16 312 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 NAT14Q8WUY8 206 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 HEXDCQ8WVB3 486 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 C12orf66Q96MD2 445 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 COPS8Q99627 209 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 TSGA10Q9BZW7 698 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 EPHA6Q9UF33 1036 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 ACSL5Q9ULC5 683 aa12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 R3HDM2Q9Y2K5 976 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-205ENST00000570828 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 B8ZZF3 427 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 CCL22O00626 93 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 LDB2O43679 373 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 KIF1CO43896 1103 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 METTL18O95568 372 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 AP2A1O95782 977 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 DLGAP3O95886 979 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 MC4RP32245 332 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 PRLHRP49683 370 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 GDF10P55107 478 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SH3BP2P78314 561 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 ABHD18Q0P651 414 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 MSLNQ13421 630 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 KRT33BQ14525 404 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 IL11RAQ14626 422 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 POU6F1Q14863 301 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 ZRANB3Q5FWF4 1079 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SEL1L2Q5TEA6 688 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 KCTD11Q693B1 232 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 BORAQ6PGQ7 559 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 OOSP2Q86WS3 158 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 RASGRP3Q8IV61 690 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 UNC5BQ8IZJ1 945 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 EXD3Q8N9H8 876 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SLC35B2Q8TB61 432 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 HM13Q8TCT9 377 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 UBXN4Q92575 508 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 HES6Q96HZ4 224 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SLC45A3Q96JT2 553 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 LINC00615Q96LM1 132 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 ALS2CR12Q96Q35 445 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SLC12A9Q9BXP2 914 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SPRY4Q9C004 299 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 RAB33BQ9H082 229 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 FAM96AQ9H5X1 160 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
CTDNEP1-205ENST00000570828 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 LOC101059948A0A1B0GTJ6 334 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 TCRBV7S2A1N4TA0A589 114 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 OR5K3A6NET4 321 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 PSMD3O43242 534 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 KRT86O43790 486 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 POLBP06746 335 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 SFTPCP11686 197 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 ATP1B2P14415 290 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 TPH1P17752 444 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 NELFEP18615 380 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 ACRV1P26436 265 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 STAT5AP42229 794 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 ARL4DP49703 201 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 GSDMDP57764 484 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 PPP1CAP62136 330 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
CTDNEP1-205ENST00000570828 MAP7Q14244 749 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms