RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CBSLP0DN79 551 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ENO3P13929 434 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF37AP17032 561 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 KRT4P19013 534 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 DGKAP23743 735 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 GABRB3P28472 473 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 GCAP28676 217 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 HPDP32754 393 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CA5AP35218 305 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CBSP35520 551 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 HALP42357 657 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 MAPK9P45984 424 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ARRB1P49407 418 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CDKN2DP55273 166 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TAS2R39P59534 338 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 IL2P60568 153 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 B4GALNT1Q00973 533 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 RELBQ01201 579 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLOD1Q02809 727 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 HSPA14Q0VDF9 509 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF460Q14592 562 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZKSCAN8Q15776 578 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 LPAL2Q16609 132 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM83EQ2M2I3 478 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 KHDC1Q4VXA5 237 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLEKHS1Q5SXH7 462 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 AGAP9Q5VTM2 703 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 KCTD16Q68DU8 428 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF549Q6P9A3 640 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 LAYNQ6UX15 382 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CHST15Q7LFX5 561 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRABD2AQ86V40 505 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 AMZ2Q86W34 360 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SYT12Q8IV01 421 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 OXR1Q8N573 874 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 NKAPQ8N5F7 415 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PNPLA1Q8N8W4 532 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CCDC63Q8NA47 563 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZBTB44Q8NCP5 570 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CEP76Q8TAP6 659 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CD200R1Q8TD46 325 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 NAT14Q8WUY8 206 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SREK1Q8WXA9 508 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 DNASE2BQ8WZ79 361 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR1E3Q8WZA6 343 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ALKBH8Q96BT7 664 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 LINGO1Q96FE5 620 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 APOPT1Q96IL0 206 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SCYL1Q96KG9 808 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 BMFQ96LC9 184 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 FOPNLQ96NB1 174 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 BIRC8Q96P09 236 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 OLFM1Q99784 485 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TIMM29Q9BSF4 260 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 GSDMCQ9BYG8 508 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 EBF2Q9HAK2 575 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMBIM4Q9HC24 238 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATP13A2Q9NQ11 1180 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 C11orf16Q9NQ32 467 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 NKIRAS1Q9NYS0 192 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 MID2Q9UJV3 735 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 GMEB2Q9UKD1 530 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMPRSS11EQ9UL52 423 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 CNOT6Q9ULM6 557 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SMG5Q9UPR3 1016 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC17A4Q9Y2C5 497 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ACOT9Q9Y305 439 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRKAB1Q9Y478 270 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ACTL7BQ9Y614 415 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRSS21Q9Y6M0 314 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 MYLKQ15746 1914 aa6.46□□□□□ -1.37
CTDNEP1-204ENST00000570484 MGAT4DA6NG13 374 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 A6NJY4 79 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 EIF3FO00303 357 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 BTN3A1O00481 513 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDK2AP1O14519 115 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CHUKO15111 745 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SCAMP1O15126 338 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 VILLO15195 856 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ST8SIA5O15466 376 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 YKT6O15498 198 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KDM1AO60341 852 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KCNJ13O60928 360 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLXNA2O75051 1894 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 POP7O75817 140 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CER1O95813 267 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 RPN2P04844 631 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CEACAM5P06731 702 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LTA4HP09960 611 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC35E2BP0CK96 405 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC166P0CW27 439 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC2A4P14672 509 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 BRAFP15056 766 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CD9P21926 228 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 MPLP40238 635 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC26A3P40879 764 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms