RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DESI2Q9BSY9 194 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 FUCA2Q9BTY2 467 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 UTP14AQ9BVJ6 771 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 LRRC2Q9BYS8 371 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 NACAP1Q9BZK3 213 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 EDEM3Q9BZQ6 932 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 NAT10Q9H0A0 1025 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 GOLPH3LQ9H4A5 285 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TASP1Q9H6P5 420 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 EPB41L5Q9HCM4 733 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 ACSS1Q9NUB1 689 aaPredicted RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 AMACRQ9UHK6 382 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 FBXW11Q9UKB1 542 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 CARMIL3Q8ND23 1372 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 LAMA4Q16363 1823 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 WNK3Q9BYP7 1800 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 AHDC1Q5TGY3 1603 aaPredicted RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 RTL9Q8NET4 1388 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 TCRBV21S2A2A0A5A6 115 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 TRBC2A0A5B9 178 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CPED1A4D0V7 1026 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 BECN2A8MW95 431 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 KDM4EB2RXH2 506 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 I6L893 689 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 MDM4O15151 490 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 SPRY1O43609 319 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 LDB2O43679 373 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ZC3H11AO75152 810 aaKnown RBP eCLIP3.69□□□□□ -1.82
UBR1-211ENST00000569971 CNOT3O75175 753 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 ZWINTO95229 277 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CTDNEP1O95476 244 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 C22orf31O95567 290 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 YEATS4O95619 227 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 KLKB1P03952 638 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 PRLRP16471 622 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 MC5RP33032 325 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 HAND2P61296 217 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 PPP2R2BQ00005 443 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DDR1Q08345 913 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 GRIK2Q13002 908 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 MYBPC2Q14324 1141 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 STK38Q15208 465 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ALX1Q15699 326 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 HLFQ16534 295 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 GLIPR1L2Q4G1C9 344 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DCAF6Q58WW2 860 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 KRBOX4Q5JUW0 171 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 Q5PR19 223 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 WASHC2DQ5SRD0 308 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 C6orf163Q5TEZ5 329 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 GGNBP1Q5YKI7 109 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 METTL2BQ6P1Q9 378 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 SHQ1Q6PI26 577 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 SLC2A7Q6PXP3 512 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 RBM43Q6ZSC3 357 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 MON1BQ7L1V2 547 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CHST3Q7LGC8 479 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CCDC186Q7Z3E2 898 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 PATL1Q86TB9 770 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 PALB2Q86YC2 1186 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CEP57L1Q8IYX8 460 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ZNF34Q8IZ26 560 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 HM13Q8TCT9 377 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 SCARB1Q8WTV0 552 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 PIBF1Q8WXW3 757 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 MRPS27Q92552 414 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 WASF1Q92558 559 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 SIPA1Q96FS4 1042 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 VMP1Q96GC9 406 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 METTL2AQ96IZ6 378 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 NUDCD1Q96RS6 583 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 C1QTNF7Q9BXJ2 289 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 FAM129AQ9BZQ8 928 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 KRT23Q9C075 422 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 NAPBQ9H115 298 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DENND2DQ9H6A0 471 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 PPP1R3EQ9H7J1 279 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DNAJC18Q9H819 358 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ZWILCHQ9H900 591 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 PIH1D3Q9NQM4 214 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 ANO10Q9NW15 660 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 TMEM51Q9NW97 253 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 OR6C3Q9NZP0 311 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 SELENONQ9NZV5 590 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 CRNNQ9UBG3 495 aaPredicted RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 DNAJB4Q9UDY4 337 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 OR14J1Q9UGF5 321 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 HACL1Q9UJ83 578 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ANAPC5Q9UJX4 755 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 PCDHA12Q9UN75 941 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ZNF148Q9UQR1 794 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 RAI2Q9Y5P3 530 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 DOT1LQ8TEK3 1739 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 ARAP2Q8WZ64 1704 aa3.69□□□□□ -1.82
UBR1-211ENST00000569971 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.69□□□□□ -1.82
UBR1-211ENST00000569971 LRP5O75197 1615 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms