RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ZNF165P49910 485 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 DCDP81605 110 aaKnown RBP8.43□□□□□ -1.06
SMG1-216ENST00000569122 DMPKQ09013 629 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 TMEM115Q12893 351 aaPredicted RBP8.43□□□□□ -1.06
SMG1-216ENST00000569122 ABRQ12979 859 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 XRCC4Q13426 336 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 KRT33BQ14525 404 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PRKD1Q15139 912 aaPredicted RBP8.43□□□□□ -1.06
SMG1-216ENST00000569122 HIF1AQ16665 826 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 CA9Q16790 459 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PTCHD3Q3KNS1 767 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PRAMEF17Q5VTA0 474 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PRAMEF13Q5VWM6 474 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 CERS6Q6ZMG9 384 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 CEP97Q8IW35 865 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 CHDHQ8NE62 594 aaPredicted RBP8.43□□□□□ -1.06
SMG1-216ENST00000569122 DENND1AQ8TEH3 1009 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 NR4A3Q92570 626 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 TLR10Q9BXR5 811 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMG1-216ENST00000569122 HEBP2Q9Y5Z4 205 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 TACC2O95359 2948 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 CCDC66A2RUB6 948 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 MATN3O15232 486 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 PMPCBO75439 489 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 PRLP01236 227 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 CRYABP02511 175 aaKnown RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 PIM1P11309 404 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 MTHFD1P11586 935 aaKnown RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 DRD2P14416 443 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 HOXB4P17483 251 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 ITGAXP20702 1163 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 MIPP30301 263 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 PCK1P35558 622 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 CA7P43166 264 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 KPNA2P52292 529 aaKnown RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 TLE4Q04727 773 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 MAMLD1Q13495 774 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 DPYSL2Q16555 572 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 CCDC122Q5T0U0 273 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ZNF648Q5T619 568 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 FAM69BQ5VUD6 431 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ZDHHC20Q5W0Z9 365 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ACAD10Q6JQN1 1059 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 CCDC70Q6NSX1 233 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ISLR2Q6UXK2 745 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 HOOK3Q86VS8 718 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ZNF547Q8IVP9 402 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 MCOLN2Q8IZK6 566 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 OR1L3Q8NH93 324 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 DNAJB8Q8NHS0 232 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 GDAP1Q8TB36 358 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 FATE1Q969F0 183 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 MTFMTQ96DP5 389 aaKnown RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 MAGEB10Q96LZ2 347 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 VPS35Q96QK1 796 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 PCDHB18PQ96TA0 734 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 LHPPQ9H008 270 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 KIR3DX1Q9H7L2 352 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ZBTB20Q9HC78 741 aaPredicted RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 MAGEE1Q9HCI5 957 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 ARFGAP3Q9NP61 516 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 TXLNGQ9NUQ3 528 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 IMP3Q9NV31 184 aaKnown RBP8.42□□□□□ -1.06
SMG1-216ENST00000569122 RBM22Q9NW64 420 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMG1-216ENST00000569122 ACSL5Q9ULC5 683 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 WDR37Q9Y2I8 494 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 TTLL3Q9Y4R7 772 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 NIPBLQ6KC79 2804 aaeCLIP8.42□□□□□ -1.06
SMG1-216ENST00000569122 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
SMG1-216ENST00000569122 TRAV17A0A0B4J275 112 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 DYTNA2CJ06 578 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 GSAPA4D1B5 854 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 POP7O75817 140 aaKnown RBP8.41□□□□□ -1.06
SMG1-216ENST00000569122 LCA5LO95447 670 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 CLDN14O95500 239 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 HLA-DPA1P20036 260 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 AMPD1P23109 780 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 MMP11P24347 488 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 KCNK10P57789 538 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 POLR2FP61218 127 aaKnown RBP8.41□□□□□ -1.06
SMG1-216ENST00000569122 QPCTQ16769 361 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 ZNF789Q5FWF6 425 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 FKBP15Q5T1M5 1219 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 ALS2CLQ60I27 953 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 METRNLQ641Q3 311 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
SMG1-216ENST00000569122 ZNF324BQ6AW86 544 aaPredicted RBP8.41□□□□□ -1.06
SMG1-216ENST00000569122 RHBDD2Q6NTF9 364 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 TLDC1Q6P9B6 456 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 TMC3Q7Z5M5 1100 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 POLNQ7Z5Q5 900 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 PPP1R32Q7Z5V6 425 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 C11orf96Q7Z7L8 435 aa8.41□□□□□ -1.06
SMG1-216ENST00000569122 MMP21Q8N119 569 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms