RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 PEX13Q92968 403 aa28.72■■■□□ 2.19
RAB40C-211ENST00000568586 TGM7Q96PF1 710 aa28.72■■■□□ 2.19
RAB40C-211ENST00000568586 EIF2B3Q9NR50 452 aaKnown RBP28.72■■■□□ 2.19
RAB40C-211ENST00000568586 PILRAQ9UKJ1 303 aa28.72■■■□□ 2.19
RAB40C-211ENST00000568586 E7EVH7 732 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 AP2A2O94973 939 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 ADRA1DP25100 572 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 SRSF6Q13247 344 aaKnown RBP28.71■■■□□ 2.19
RAB40C-211ENST00000568586 ITIH4Q14624 930 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 DBN1Q16643 649 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 MANEAQ5SRI9 462 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 MICALCLQ6ZW33 695 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 LILRA3Q8N6C8 439 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-211ENST00000568586 SGSM3Q96HU1 749 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 RMDN2Q96LZ7 410 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 HOMER3Q9NSC5 361 aa28.71■■■□□ 2.19
RAB40C-211ENST00000568586 IMP3Q9NV31 184 aaKnown RBP28.71■■■□□ 2.19
RAB40C-211ENST00000568586 SLC35G4P0C7Q5 338 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 ZSCAN5DPP0CG00 497 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 MSNP26038 577 aaKnown RBP28.7■■■□□ 2.18
RAB40C-211ENST00000568586 FOXN2P32314 431 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 CCDC38Q502W7 563 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 TSTD2Q5T7W7 516 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 PACS1Q6VY07 963 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 PPP1R21Q6ZMI0 780 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 NLRP9Q7RTR0 991 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 TAS2R42Q7RTR8 314 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 SLC39A7Q92504 469 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 C12orf66Q96MD2 445 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 OR52A5Q9H2C5 316 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 KIR3DX1Q9H7L2 352 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 VPS37BQ9H9H4 285 aa28.7■■■□□ 2.18
RAB40C-211ENST00000568586 TMEM184BQ9Y519 407 aaPredicted RBP28.7■■■□□ 2.18
RAB40C-211ENST00000568586 CCDC162PA2VCL2 907 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 APRTP07741 180 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 NSG1P42857 185 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 LMAN1P49257 510 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 RPA4Q13156 261 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 CLDN19Q8N6F1 224 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 COG4Q9H9E3 785 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 GRPEL1Q9HAV7 217 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 APMAPQ9HDC9 416 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 SLC24A2Q9UI40 661 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 HEBP2Q9Y5Z4 205 aa28.69■■■□□ 2.18
RAB40C-211ENST00000568586 CFAP20Q9Y6A4 193 aaKnown RBP28.69■■■□□ 2.18
RAB40C-211ENST00000568586 PIEZO2Q9H5I5 2752 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 POLR1CO15160 346 aaPredicted RBP28.68■■■□□ 2.18
RAB40C-211ENST00000568586 KIF1CO43896 1103 aaKnown RBP28.68■■■□□ 2.18
RAB40C-211ENST00000568586 CEP104O60308 925 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 POLBP06746 335 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 NDUFS1P28331 727 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 CD151P48509 253 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 ATP1A2P50993 1020 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 VASH2Q86V25 355 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 CTRCQ99895 268 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 COLEC10Q9Y6Z7 277 aa28.68■■■□□ 2.18
RAB40C-211ENST00000568586 OR5K3A6NET4 321 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 NELFEP18615 380 aaKnown RBP28.67■■■□□ 2.18
RAB40C-211ENST00000568586 IL11RAQ14626 422 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 CACHD1Q5VU97 1274 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 PRELID2Q8N945 189 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 UBXN4Q92575 508 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 HDAC10Q969S8 669 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 SLC41A2Q96JW4 573 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 ZNF778Q96MU6 729 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 CD180Q99467 661 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 SLC2A6Q9UGQ3 507 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 JRKLQ9Y4A0 524 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 TCAF1Q9Y4C2 921 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 PCDHGA4Q9Y5G9 962 aa28.67■■■□□ 2.18
RAB40C-211ENST00000568586 OR51F1A6NGY5 319 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 QSOX1O00391 747 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 RAD1O60671 282 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 WT1P19544 449 aaPredicted RBP28.66■■■□□ 2.18
RAB40C-211ENST00000568586 CXCR5P32302 372 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 LYPLAL1Q5VWZ2 237 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 IRGCQ6NXR0 463 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 DUS1LQ6P1R4 473 aaKnown RBP28.66■■■□□ 2.18
RAB40C-211ENST00000568586 RASGEF1CQ8N431 466 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 SMARCAL1Q9NZC9 954 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 FAM8A1Q9UBU6 413 aa28.66■■■□□ 2.18
RAB40C-211ENST00000568586 CCDC78A2IDD5 438 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 RASSF9O75901 435 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 DLGAP3O95886 979 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 MAP4P27816 1152 aaKnown RBP28.65■■■□□ 2.18
RAB40C-211ENST00000568586 KCNJ1P48048 391 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 PPP1CAP62136 330 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 PLCL1Q15111 1095 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 AFTPHQ6ULP2 937 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 CERS6Q6ZMG9 384 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 FAM92BQ6ZTR7 304 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 ZNF534Q76KX8 674 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 CACNA2D3Q8IZS8 1091 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 CARFQ8N187 725 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 JPH3Q8WXH2 748 aaPredicted RBP28.65■■■□□ 2.18
RAB40C-211ENST00000568586 TTC7AQ9ULT0 858 aaPredicted RBP28.65■■■□□ 2.18
RAB40C-211ENST00000568586 PRSS21Q9Y6M0 314 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 PIKFYVEQ9Y2I7 2098 aa28.65■■■□□ 2.18
RAB40C-211ENST00000568586 AP3B1O00203 1094 aa28.64■■■□□ 2.18
RAB40C-211ENST00000568586 GOT2P00505 430 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms