RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 H2AFJQ9BTM1 129 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 OR2AG1Q9H205 316 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 NOL11Q9H8H0 719 aaKnown RBP6.94□□□□□ -1.3
SMG1-215ENST00000568239 SMOXQ9NWM0 555 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 LIMD1Q9UGP4 676 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 BAIAP2L1Q9UHR4 511 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 LNPEPQ9UIQ6 1025 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 PCTPQ9UKL6 214 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 DNAJC15Q9Y5T4 150 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 GON4LQ3T8J9 2241 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KIAA1549LQ6ZVL6 1849 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 GOLGA4Q13439 2230 aaKnown RBP6.94□□□□□ -1.3
SMG1-215ENST00000568239 DNAH14Q0VDD8 3507 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 RGSL1A5PLK6 1076 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KRT87PA6NCN2 255 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 K7EQS6 105 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 PSMD11O00231 422 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 E2F3O00716 465 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 MLYCDO95822 493 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 FTH1P02794 183 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 LINC00032P0C843 101 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 GM2AP17900 193 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 AOC1P19801 751 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 AOAHP28039 575 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 CTHP32929 405 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 PREPP48147 710 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 COPAP53621 1224 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 ABRQ12979 859 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KLF10Q13118 480 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 HTR4Q13639 388 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KIAA1211LQ6NV74 962 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 DOK6Q6PKX4 331 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 CYHR1Q6ZMK1 362 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 NRSN1Q8IZ57 195 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 LILRA3Q8N6C8 439 aaPredicted RBP6.94□□□□□ -1.3
SMG1-215ENST00000568239 SNX31Q8N9S9 440 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 RBM15BQ8NDT2 890 aaKnown RBP6.94□□□□□ -1.3
SMG1-215ENST00000568239 OR56A4Q8NGH8 313 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 AGAP11Q8TF27 550 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 ASZ1Q8WWH4 475 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KLK6Q92876 244 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 TMEM159Q96B96 161 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 TUBGCP3Q96CW5 907 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 CMTM5Q96DZ9 223 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 COQ10AQ96MF6 247 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 MIPEPQ99797 713 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 TRIM54Q9BYV2 358 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 SLC6A17Q9H1V8 727 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 KLC4Q9NSK0 619 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 LMCD1Q9NZU5 365 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 GIMAP2Q9UG22 337 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 CIDEBQ9UHD4 219 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 CD207Q9UJ71 328 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 OARD1Q9Y530 152 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
SMG1-215ENST00000568239 COL4A3Q01955 1670 aa6.94□□□□□ -1.3
SMG1-215ENST00000568239 IGLON5A6NGN9 336 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PIP5K1BO14986 540 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 UBDO15205 165 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KLK8O60259 260 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ATG13O75143 517 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 RASSF9O75901 435 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 OR4F21O95013 312 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CHEK2O96017 543 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PCCBP05166 539 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ENO3P13929 434 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 CD1EP15812 388 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SLC25A3Q00325 362 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CUL3Q13618 768 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GTF2H2Q13888 395 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 STARD3Q14849 445 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GTF2H2CQ6P1K8 395 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CRTC3Q6UUV7 619 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GPRIN3Q6ZVF9 776 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 AADATQ8N5Z0 425 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 C3orf30Q96M34 536 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 HBEGFQ99075 208 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CADM1Q9BY67 442 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SERGEFQ9UGK8 458 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 FADS3Q9Y5Q0 445 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PIAS3Q9Y6X2 628 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KNL1Q8NG31 2342 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PLXNA2O75051 1894 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 C2CD4DB7Z1M9 353 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 AIM2O14862 343 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KPNA5O15131 536 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GSC2O15499 205 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TM7SF2O76062 418 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ESRRBO95718 433 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 EGFP01133 1207 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ASGR2P07307 311 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ANXA5P08758 320 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CBSLP0DN79 551 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 MAP4P27816 1152 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 DRD3P35462 400 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CBSP35520 551 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms