RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CFAP52Q8N1V2 620 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 CARNMT1Q8N4J0 409 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 BIRC7Q96CA5 298 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 LINGO1Q96FE5 620 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 RAD9AQ99638 391 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 SLC30A3Q99726 388 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 C19orf43Q9BQ61 176 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 NPLQ9BXD5 320 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 RPF2Q9H7B2 306 aaKnown RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 CD274Q9NZQ7 290 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 TRIM64BA6NI03 449 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 ANKRD66B4E2M5 251 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 MSH3P20585 1137 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 HRH2P25021 359 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 DCKP27707 260 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 IL12AP29459 219 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 TGFBIQ15582 683 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 Q6ZSR9 355 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 ADAMTSL2Q86TH1 951 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 ITIH5Q86UX2 942 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 PIANPQ8IYJ0 282 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 TTC30BQ8N4P2 665 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 SIDT2Q8NBJ9 832 aaKnown RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 OR8J3Q8NGG0 315 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 EEF1AKMT1Q8WVE0 214 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CYGBQ8WWM9 190 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 HERVK_113Q902F9 699 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 NSMCE2Q96MF7 247 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 RDH12Q96NR8 316 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 ZBED2Q9BTP6 218 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 PKD2L2Q9NZM6 624 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 TMEM9Q9P0T7 183 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 PCDHB1Q9Y5F3 818 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 IRAK3Q9Y616 596 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 STX7O15400 261 aaKnown RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 NIPSNAP2O75323 286 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 OR4F21O95013 312 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CNPP09543 421 aaKnown RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 JAK1P23458 1154 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 TIGD2Q4W5G0 525 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CCNYL2Q5T2Q4 361 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 DLEU7Q6UYE1 221 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 IFNEQ86WN2 208 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CLVS1Q8IUQ0 354 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 NACA2Q9H009 215 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 P2RY12Q9H244 342 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 EIF2B4Q9UI10 523 aaKnown RBP16.51■□□□□ 0.23
CMTM3-213ENST00000566756 DHRS7Q9Y394 339 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 RAI2Q9Y5P3 530 aa16.51■□□□□ 0.23
CMTM3-213ENST00000566756 DEAF1O75398 565 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-213ENST00000566756 RHOCP08134 193 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 VARSP26640 1264 aaKnown RBP16.5■□□□□ 0.23
CMTM3-213ENST00000566756 HLCSP50747 726 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 ERVPABLB-1P60509 514 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 GLYATQ6IB77 296 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 LILRA6Q6PI73 481 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 CERS6Q6ZMG9 384 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 ZNF783Q6ZMS7 281 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 LPCAT1Q8NF37 534 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 ACOX2Q99424 681 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 SPON2Q9BUD6 331 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 CHID1Q9BWS9 393 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 MCOLN1Q9GZU1 580 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 PLGRKTQ9HBL7 147 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 INTS7Q9NVH2 962 aaKnown RBP16.5■□□□□ 0.23
CMTM3-213ENST00000566756 FKBPLQ9UIM3 349 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 AP3M1Q9Y2T2 418 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 ZNF711Q9Y462 761 aa16.5■□□□□ 0.23
CMTM3-213ENST00000566756 ZFC3H1O60293 1989 aaKnown RBP16.5■□□□□ 0.23
CMTM3-213ENST00000566756 MKI67P46013 3256 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 A0A1B0GVM2 712 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 NCF1BA6NI72 391 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 NCF1CA8MVU1 366 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 E5RI56 91 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 HPRP00739 348 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 NCF1P14598 390 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 NCK1P16333 377 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CDKN1CP49918 316 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CLCN7P51798 805 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 PWP1Q13610 501 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CBX2Q14781 532 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 FUT11Q495W5 492 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 TMEM150AQ86TG1 271 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CDYL2Q8N8U2 506 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 OR52E4Q8NGH9 312 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 POP5Q969H6 163 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 C12orf43Q96C57 262 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 TMEM74Q96NL1 305 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 KLF16Q9BXK1 252 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms