RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 SIDT1Q9NXL6 827 aaKnown RBP8.19□□□□□ -1.1
CDH13-207ENST00000565636 CPNE7Q9UBL6 633 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
CDH13-207ENST00000565636 PCSK1NQ9UHG2 260 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 IP6K2Q9UHH9 426 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 ZNHIT2Q9UHR6 403 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 CNOT6Q9ULM6 557 aaKnown RBP8.19□□□□□ -1.1
CDH13-207ENST00000565636 MAN2B2Q9Y2E5 1009 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 PCDHGA9Q9Y5G4 932 aaKnown RBP8.19□□□□□ -1.1
CDH13-207ENST00000565636 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
CDH13-207ENST00000565636 SHANK1Q9Y566 2161 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 A8MX80 341 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 H3BS24 57 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 KMOO15229 486 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 GRID2O43424 1007 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 DDAH2O95865 285 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 VCLP18206 1134 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 POLD2P49005 469 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 KLK7P49862 253 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 RPS26P62854 115 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 UBE2IP63279 158 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 GALNT2Q10471 571 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 HADHQ16836 314 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 FILIP1LQ4L180 1135 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 ZDHHC20Q5W0Z9 365 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 ARHGAP36Q6ZRI8 547 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 TMEM26Q6ZUK4 368 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 APTXQ7Z2E3 356 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 TIPARPQ7Z3E1 657 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 NETO2Q8NC67 525 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 UBXN4Q92575 508 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 PEBP4Q96S96 227 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 TIMM29Q9BSF4 260 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 MLPHQ9BV36 600 aaPredicted RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 TDRD1Q9BXT4 1180 aaKnown RBP8.18□□□□□ -1.1
CDH13-207ENST00000565636 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 BRD8Q9H0E9 1235 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 SYTL2Q9HCH5 934 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 MAGEE1Q9HCI5 957 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 MLXIPLQ9NP71 852 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 POT1Q9NUX5 634 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 TBC1D29Q9UFV1 150 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
CDH13-207ENST00000565636 NOTCH2Q04721 2471 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 MYO1FO00160 1098 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 CREG1O75629 220 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 RFPL1O75677 317 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 UBXN7O94888 489 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 ASMTLO95671 621 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 CBX7O95931 251 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PRLP01236 227 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 VIPP01282 170 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PDHA1P08559 390 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PYGMP11217 842 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 IL4RP24394 825 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PMS2P54278 862 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 NFKB2Q00653 900 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 SKIDA1Q1XH10 827 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 DENND2CQ68D51 928 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 SPOCD1Q6ZMY3 1216 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
CDH13-207ENST00000565636 CHST15Q7LFX5 561 aaPredicted RBP8.17□□□□□ -1.1
CDH13-207ENST00000565636 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PTRH1Q86Y79 214 aaKnown RBP8.17□□□□□ -1.1
CDH13-207ENST00000565636 TRAM1L1Q8N609 369 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PATE1Q8WXA2 126 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 SCAMP4Q969E2 229 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 LRFN5Q96NI6 719 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 VPS35Q96QK1 796 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 ALPK1Q96QP1 1244 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 CD180Q99467 661 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 C19orf43Q9BQ61 176 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 ZNF670Q9BS34 389 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 RIOK2Q9BVS4 552 aaKnown RBP8.17□□□□□ -1.1
CDH13-207ENST00000565636 HAUS4Q9H6D7 363 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PCDH9Q9HC56 1237 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 PDE7BQ9NP56 450 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 GPATCH2LQ9NWQ4 482 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 TMEM98Q9Y2Y6 226 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 CAPN6Q9Y6Q1 641 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 TNRC6AQ8NDV7 1962 aaKnown RBP8.17□□□□□ -1.1
CDH13-207ENST00000565636 PIKFYVEQ9Y2I7 2098 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 SPTBP11277 2137 aa8.17□□□□□ -1.1
CDH13-207ENST00000565636 GOLGA6CA6NDK9 693 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 GOLGA6BA6NDN3 693 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 VPS4BO75351 444 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 CLDN7O95471 211 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 EPOP01588 193 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 JCHAINP01591 159 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 KRT7P08729 469 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 CD63P08962 238 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 MSL3P1P0C860 447 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 GOLGA6DP0CG33 693 aa8.16□□□□□ -1.1
CDH13-207ENST00000565636 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
CDH13-207ENST00000565636 LPOP22079 712 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms