RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 OR6J1Q8NGC5 347 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 LMO3Q8TAP4 145 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TMEM255BQ8WV15 326 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TEKT4Q8WW24 435 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 SEMA4DQ92854 862 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 NXNL1Q96CM4 212 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 ZNF830Q96NB3 372 aaPredicted RBP4.28□□□□□ -1.72
CHD9-215ENST00000565442 NEK1Q96PY6 1258 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 OR6C1Q96RD1 312 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 MEIS3Q99687 375 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 OLFM1Q99784 485 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 BAG1Q99933 345 aaPredicted RBP4.28□□□□□ -1.72
CHD9-215ENST00000565442 NEURL2Q9BR09 285 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 C16orf70Q9BSU1 422 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 AP1M1Q9BXS5 423 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 ANKRD2Q9GZV1 360 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 RABEP2Q9H5N1 569 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 C5AR2Q9P296 337 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 RHCGQ9UBD6 479 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 YIPF1Q9Y548 306 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 PCDHAC2Q9Y5I4 1007 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 A0A0B4J293 547 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 TCRBV21S2A2A0A5A6 115 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 HEPACAM2A8MVW5 462 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 SPRY1O43609 319 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 TBX10O75333 385 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 GCNT3O95395 438 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 TRUB2O95900 331 aaKnown RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 MC5RP33032 325 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 CCR3P51677 355 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 FUT6P51993 359 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 EEF1A1P68104 462 aaKnown RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 GCNT6Q5T4J0 391 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 EEF1A1P5Q5VTE0 462 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 UNQ6126/PRO20091Q6UXV3 157 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 TMEM173Q86WV6 379 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 TC2NQ8N9U0 490 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 OR10S1Q8NGN2 331 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 OR2AJ1Q8NGZ0 328 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 SORCS1Q8WY21 1168 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 SPACA9Q96E40 222 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 LINGO1Q96FE5 620 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 IGSF21Q96ID5 467 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 LINC00615Q96LM1 132 aaPredicted RBP4.27□□□□□ -1.73
CHD9-215ENST00000565442 IL17FQ96PD4 163 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 TBC1D17Q9HA65 648 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 HHATLQ9HCP6 504 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 TRPC7Q9HCX4 862 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 OLAHQ9NV23 265 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 DLGAP4Q9Y2H0 992 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 PCDHGB1Q9Y5G3 927 aa4.27□□□□□ -1.73
CHD9-215ENST00000565442 PRSS51A0A1B0GVH4 220 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 C5orf60A6NFR6 353 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 ANKRD66B4E2M5 251 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 TULP2O00295 520 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 XRCC3O43542 346 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 BUD23O43709 281 aaKnown RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 PFKFB1P16118 471 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 GM2AP17900 193 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 EEF1DP29692 281 aaKnown RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 PSMC4P43686 418 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 ARCN1P48444 511 aaKnown RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 HILS1P60008 231 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 RALGDSQ12967 914 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 CRY2Q49AN0 593 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 CAPRIN2Q6IMN6 1127 aaKnown RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 PLXDC2Q6UX71 529 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 PLEKHM3Q6ZWE6 761 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 SLC9B2Q86UD5 537 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 TSPAN14Q8NG11 270 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 LNX1Q8TBB1 728 aaPredicted RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 VPS33AQ96AX1 596 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 RMDN1Q96DB5 314 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 FNDC11Q9BVV2 318 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 GPR88Q9GZN0 384 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 DDX31Q9H8H2 851 aaKnown RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 EBF2Q9HAK2 575 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 OSER1Q9NX31 292 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 MIOSQ9NXC5 875 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
CHD9-215ENST00000565442 ZHX1Q9UKY1 873 aaPredicted RBP4.26□□□□□ -1.73
CHD9-215ENST00000565442 ZNF541Q9H0D2 1346 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 EDDM13A0A1B0GTR0 161 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 ANKUB1A6NFN9 424 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 A8MXE2 369 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 H7C0S8 307 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms