RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RSU1Q15404 277 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZBTB6Q15916 424 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LRRC26Q2I0M4 334 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 METTL21CQ5VZV1 264 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ALG1LQ6GMV1 187 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ARNTL2Q8WYA1 636 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ACDQ96AP0 544 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SH3KBP1Q96B97 665 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MACROD1Q9BQ69 325 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 IFT80Q9P2H3 777 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TNFAIP8O95379 198 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 APBB3O95704 486 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ITGA2BP08514 1039 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HLA-EP13747 358 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AKT1P31749 480 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 KCNC1P48547 511 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 BST2Q10589 180 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 PAN3Q58A45 887 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ADNP2Q6IQ32 1131 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CES5AQ6NT32 575 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 UNC5DQ6UXZ4 953 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PIWIL4Q7Z3Z4 852 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SCD5Q86SK9 330 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CHSY1Q86X52 802 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MMAAQ8IVH4 418 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 DPP10Q8N608 796 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 UXS1Q8NBZ7 420 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MZB1Q8WU39 189 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 IP6K3Q96PC2 410 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CDC6Q99741 560 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 BCL7BQ9BQE9 202 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LINC00597Q9H2U6 94 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MIEF1Q9NQG6 463 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MGAT4AQ9UM21 535 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TDRKHQ9Y2W6 561 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 STX7O15400 261 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 GYG2O15488 501 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF7P17097 686 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 HOXC12P31275 282 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CCNFP41002 786 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TRIM25Q14258 630 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 MPP7Q5T2T1 576 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LPCAT4Q643R3 524 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GALNT10Q86SR1 603 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PIAS4Q8N2W9 510 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 AGAP11Q8TF27 550 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HTR3CQ8WXA8 447 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CAVIN3Q969G5 261 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PNPLA2Q96AD5 504 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ABHD8Q96I13 439 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ITCHQ96J02 903 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ELMO2Q96JJ3 720 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AIFM2Q9BRQ8 373 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GSDMCQ9BYG8 508 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 RBM22Q9NW64 420 aaKnown RBP eCLIP3.31□□□□□ -1.884e-7■■■□□ 18.6
CHD9-213ENST00000564845 TAS2R13Q9NYV9 303 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PCYOX1Q9UHG3 505 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 FZD10Q9ULW2 581 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TBC1D30Q9Y2I9 924 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MRPS23Q9Y3D9 190 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 CELSR1Q9NYQ6 3014 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PRRC2BQ5JSZ5 2229 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 LIN7AO14910 233 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 BCAS2O75934 225 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ALPPL2P10696 532 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CCNA2P20248 432 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GRM5P41594 1212 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 RPIAP49247 311 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LAPTM4AQ15012 233 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 KIF19Q2TAC6 998 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ATP6AP1LQ52LC2 224 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 N4BP2L1Q5TBK1 243 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 NADSYN1Q6IA69 706 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ARL9Q6T311 187 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ALKAL1Q6UXT8 129 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 BAIAP2L2Q6UXY1 529 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CYP2R1Q6VVX0 501 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PHF13Q86YI8 300 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SLC44A2Q8IWA5 706 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 TBATAQ96M53 351 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZSWIM3Q96MP5 696 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 THTPAQ9BU02 230 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 NMUR2Q9GZQ4 415 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MAU2Q9Y6X3 613 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 A0A087X1B8 175 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 A0A1B0GTW7 788 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ANKRD33BA6NCL7 494 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SLC28A1O00337 649 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 FCHO1O14526 889 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GSTA4O15217 222 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DCXO43602 365 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ADAMTS4O75173 837 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HLA-DQB2P05538 268 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 VDRP11473 427 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CYBAP13498 195 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 NRIP1P48552 1158 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TLE2Q04725 743 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MADCAM1Q13477 382 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms