RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	ZNF805	Q5CZA5	627 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	BRMS1L	Q5PSV4	323 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	MANEA	Q5SRI9	462 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	KLHL10	Q6JEL2	608 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	TRNP1	Q6NT89	227 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	RETSAT	Q6NUM9	610 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	TRIM65	Q6PJ69	517 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	LRRC31	Q6UY01	552 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	LEKR1	Q6ZMV7	388 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	MACC1	Q6ZN28	852 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	RD3	Q7Z3Z2	195 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	KIF18B	Q86Y91	864 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	HSCB	Q8IWL3	235 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	DRC7	Q8IY82	874 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	RYBP	Q8N488	228 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	ARL10	Q8N8L6	244 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	ZNF397	Q8NF99	534 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	JPH3	Q8WXH2	748 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	ST8SIA2	Q92186	375 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	USP7	Q93009	1102 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	SMARCE1	Q969G3	411 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	FUBP1	Q96AE4	644 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	RAB7B	Q96AH8	199 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	PGAP3	Q96FM1	320 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	C1orf74	Q96LT6	269 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	TBATA	Q96M53	351 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	KLHL32	Q96NJ5	620 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	TBCB	Q99426	244 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	CRACR2A	Q9BSW2	395 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	FUCA2	Q9BTY2	467 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	WRAP53	Q9BUR4	548 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	MAGEB5	Q9BZ81	275 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	STRADB	Q9C0K7	418 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	RAB6C	Q9H0N0	254 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	SLC25A18	Q9H1K4	315 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	LRRN3	Q9H3W5	708 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	AJAP1	Q9UKB5	411 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	MAN1B1	Q9UKM7	699 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	LOXL2	Q9Y4K0	774 aa		5.19	□□□□□ -1.58
TCF4-223	ENST00000564343	ICE1	Q9Y2F5	2266 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	CACNA1D	Q01668	2161 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	FAM72C	H0Y354	149 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	PSMA7	O14818	248 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SMC2	O95347	1197 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SFTPC	P11686	197 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	CTSE	P14091	401 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	BPI	P17213	487 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	MAPK10	P53779	464 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	EPHB1	P54762	984 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	STX17	P56962	302 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	NANOS3	P60323	173 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	IRF4	Q15306	451 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ELOC	Q15369	112 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	IGFBP7	Q16270	282 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	MYLK3	Q32MK0	819 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SLC25A52	Q3SY17	297 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	FAM72A	Q5TYM5	149 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	FAM72D	Q6L9T8	149 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	LVRN	Q6Q4G3	990 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ENPP7	Q6UWV6	458 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ZNF783	Q6ZMS7	281 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	BNIPL	Q7Z465	357 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	TTC7B	Q86TV6	843 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SLC47A2	Q86VL8	602 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ZSCAN30	Q86W11	494 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	FAM72B	Q86X60	149 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	FAM131B	Q86XD5	332 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ZNF575	Q86XF7	245 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343		Q8N9G6	341 aa	Predicted RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	GPR156	Q8NFN8	814 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	OR2AP1	Q8NGE2	309 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	OR2W6P	Q8NHA6	318 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	NELFB	Q8WX92	580 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SHC3	Q92529	594 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ARHGEF2	Q92974	986 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ISG20	Q96AZ6	181 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	PDXP	Q96GD0	296 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	CFAP57	Q96MR6	1250 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	AGAP2	Q99490	1192 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	TTC1	Q99614	292 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ASPSCR1	Q9BZE9	553 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	EDEM3	Q9BZQ6	932 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ZYG11B	Q9C0D3	744 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	RDH14	Q9HBH5	336 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	MRPL40	Q9NQ50	206 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	SEPT10	Q9P0V9	454 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	STAP1	Q9ULZ2	295 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	GPR34	Q9UPC5	381 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	NEU3	Q9UQ49	428 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	OR1A2	Q9Y585	309 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	RNF215	Q9Y6U7	377 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	TEX15	Q9BXT5	2789 aa		5.18	□□□□□ -1.58
TCF4-223	ENST00000564343	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms