RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LRRC73Q5JTD7 316 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ZNF773Q6PK81 442 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 RANBP10Q6VN20 620 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 IGFN1Q86VF2 1251 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 RBFAQ8N0V3 343 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 PELI3Q8N2H9 469 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 LEMD2Q8NC56 503 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 OR13F1Q8NGS4 319 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ANKRD49Q8WVL7 239 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 S100ZQ8WXG8 99 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 TMEM159Q96B96 161 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 IMP4Q96G21 291 aaKnown RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 OR52E6Q96RD3 313 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 KLHL25Q9H0H3 589 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 KNL1Q8NG31 2342 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 BBIP1A8MTZ0 92 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 KPNA3O00505 521 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 JUNP05412 331 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 CLK1P49759 484 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 TNK2Q07912 1038 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 SCD5Q86SK9 330 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 ADCK1Q86TW2 530 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 MYO19Q96H55 970 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 PPP3R2Q96LZ3 170 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 AGPAT4Q9NRZ5 378 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 TMEM161AQ9NX61 479 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 CPQQ9Y646 472 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 CPNE6O95741 557 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 PABPC1P11940 636 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 DIO3P55073 304 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 CDKN2DP55273 166 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 MTPNP58546 118 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 ILF2Q12905 390 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 TECRLQ5HYJ1 363 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 TMEM214Q6NUQ4 689 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 EID3Q8N140 333 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 HJURPQ8NCD3 748 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 SPPL2AQ8TCT8 520 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 EEF1AKMT1Q8WVE0 214 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 ZNF558Q96NG5 402 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 DEFB118Q96PH6 123 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 COPS8Q99627 209 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 PSD2Q9BQI7 771 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 EMILIN2Q9BXX0 1053 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 NAA50Q9GZZ1 169 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 HPS4Q9NQG7 708 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 SLC13A4Q9UKG4 626 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 LSM1O15116 133 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 CST1P01037 141 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 UROSP10746 265 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 JUNBP17275 347 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 AGTR2P50052 363 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 PPP1R8Q12972 351 aaKnown RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 SERINC3Q13530 473 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 SPDYE7PQ495Y7 208 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 USP45Q70EL2 814 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 SERPINA9Q86WD7 417 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 SYT12Q8IV01 421 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 LSMEM2Q8N112 164 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 OR2T12Q8NG77 320 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 AUTS2Q8WXX7 1259 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 RIBC2Q9H4K1 309 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■□□□□ 9.8
RNF40-204ENST00000563683 ZNF490Q9ULM2 529 aaPredicted RBP10.31□□□□□ -0.76
RNF40-204ENST00000563683 CORINQ9Y5Q5 1042 aa10.31□□□□□ -0.76
RNF40-204ENST00000563683 KIAA1217Q5T5P2 1943 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 A0A0U1RQS6 177 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 MTMR11A4FU01 709 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 UGT2B4P06133 528 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 GPIP06744 558 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 OGNP20774 298 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 CYP2A7P20853 494 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 SNRPD1P62314 119 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 ACSM2AQ08AH3 577 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ABRQ12979 859 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 RABL3Q5HYI8 236 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ACSM2BQ68CK6 577 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 CYP2U1Q7Z449 544 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ANKRD46Q86W74 232 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 NAT16Q8N8M0 369 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 BPIFB6Q8NFQ5 453 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ELMO1Q92556 727 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 HPS1Q92902 700 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 PGAP3Q96FM1 320 aaPredicted RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 C8orf48Q96LL4 319 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TMEM74Q96NL1 305 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ATG10Q9H0Y0 220 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TMEM248Q9NWD8 314 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 IFT80Q9P2H3 777 aaPredicted RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 C5orf58C9J3I9 102 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 GJB5O95377 273 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 S1PR4O95977 384 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ITPKAP23677 461 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 POU1F1P28069 291 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 MAPK1P28482 360 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms