RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 MLXIPLQ9NP71 852 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 SLC24A2Q9UI40 661 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 PKP3Q9Y446 797 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 ARGFXA6NJG6 315 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 PSTPIP1O43586 416 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 CPNE3O75131 537 aaKnown RBP16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 SCRG1O75711 98 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 PRAMEF1O95521 474 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 MSH3P20585 1137 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 AKT1P31749 480 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 ARL4DP49703 201 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 LONRF2Q1L5Z9 754 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 NADK2Q4G0N4 442 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 DAAM2Q86T65 1068 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 SYVN1Q86TM6 617 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 OOSP2Q86WS3 158 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 VSTM4Q8IW00 320 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 THAP4Q8WY91 577 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 P3H4Q92791 437 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 MR1Q95460 341 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 RMDN2Q96LZ7 410 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 VAT1Q99536 393 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 NRTNQ99748 197 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 CHST8Q9H2A9 424 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 KIR3DX1Q9H7L2 352 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 KCND1Q9NSA2 647 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 FAM8A1Q9UBU6 413 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 ALG6Q9Y672 507 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 SPTAN1Q13813 2472 aaKnown RBP16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 TEX15Q9BXT5 2789 aa16.37■□□□□ 0.21
HDGFL3-203ENST00000563404 MED13Q9UHV7 2174 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 STX7O15400 261 aaKnown RBP16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 LCA5LO95447 670 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 TPM3P06753 285 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 GNLYP22749 145 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 CCL11P51671 97 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 RPS15P62841 145 aaKnown RBP16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 XIAPP98170 497 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ABRQ12979 859 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 TFDP3Q5H9I0 405 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 PLEKHS1Q5SXH7 462 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 HIST2H2BCQ6DN03 193 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 CAPRIN2Q6IMN6 1127 aaKnown RBP16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 MICALCLQ6ZW33 695 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 TMEM126BQ8IUX1 230 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 OR4K2Q8NGD2 314 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ADAMTS17Q8TE56 1095 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ZFPM2Q8WW38 1151 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 FICDQ9BVA6 458 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ING2Q9H160 280 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 RSPH14Q9UHP6 348 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 FKBPLQ9UIM3 349 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 ACSL5Q9ULC5 683 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 INTUQ9ULD6 942 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 BTRCQ9Y297 605 aa16.36■□□□□ 0.21
HDGFL3-203ENST00000563404 TTLL8A6PVC2 850 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 SRP72O76094 671 aaKnown RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 POLBP06746 335 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 POLR2CP19387 275 aaPredicted RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 LPOP22079 712 aaPredicted RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 RBL1P28749 1068 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 ADRA1AP35348 466 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 PTGIRP43119 386 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 TNNT3P45378 269 aaPredicted RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 LURAP1LQ8IV03 231 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 KATNAL2Q8IYT4 538 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 OR4E2Q8NGC2 313 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 CPT1CQ8TCG5 803 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 SEC14L1Q92503 715 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 APOL2Q9BQE5 337 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 SLC25A23Q9BV35 468 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 FSD1LQ9BXM9 530 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 ASB8Q9H765 288 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 LATS2Q9NRM7 1088 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 TRHDEQ9UKU6 1024 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
HDGFL3-203ENST00000563404 PCSK5Q92824 1860 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 SLC9B1P1A6NJY1 282 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 AGAP14A8MT82 685 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 HACD1B0YJ81 288 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 CBFA2T2O43439 604 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 SORBS2O94875 1100 aaKnown RBP16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 CAPN1P07384 714 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 RORAP35398 523 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 PGDP52209 483 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 HADHBP55084 474 aaKnown RBP16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 PDE1BQ01064 536 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 TAF1AQ15573 450 aaPredicted RBP16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 ZNF789Q5FWF6 425 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms