RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ACP1P24666 158 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 PTPN6P29350 595 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SERPINH1P50454 418 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 RPS6KA3P51812 740 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 HADHBP55084 474 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 NKX3-2P78367 333 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 PRR5P85299 388 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 GALK2Q01415 458 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TAP2Q03519 686 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TLE3Q04726 772 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ACSM2AQ08AH3 577 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SNTB2Q13425 540 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 OLIG2Q13516 323 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 DOC2AQ14183 400 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 NEDD9Q14511 834 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 RTP5Q14D33 572 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 DPYSL2Q16555 572 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 MLANAQ16655 118 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FUT11Q495W5 492 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 NADK2Q4G0N4 442 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 LRIF1Q5T3J3 769 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 RNASEH2BQ5TBB1 312 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 METTL11BQ5VVY1 283 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ACSM2BQ68CK6 577 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TXNDC8Q6A555 127 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TAPT1Q6NXT6 567 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TEX38Q6PEX7 206 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 PODNL1Q6PEZ8 512 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 GLB1LQ6UWU2 654 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 CD300LDQ6UXZ3 194 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TDRPQ86YL5 185 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 PSTKQ8IV42 348 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF595Q8IYB9 648 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FITM2Q8N6M3 262 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SELENOMQ8WWX9 145 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FBXO32Q969P5 355 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 DIRC2Q96SL1 478 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SMOQ99835 787 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 EGFL8Q99944 293 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 GON7Q9BXV9 100 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 POLR1EQ9GZS1 481 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 RAB17Q9H0T7 212 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 NAPBQ9H115 298 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 S1PR5Q9H228 398 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ECT2Q9H8V3 914 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 LRRC40Q9H9A6 602 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FANCEQ9HB96 536 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM118AQ9NWS6 357 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 PTGFRNQ9P2B2 879 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 CDC14AQ9UNH5 594 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF148Q9UQR1 794 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 U3KQV3 271 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 N4BP2Q86UW6 1770 aaPredicted RBP5.15□□□□□ -1.59
VPS35P1-201ENST00000563400 SLX4Q8IY92 1834 aa5.15□□□□□ -1.59
VPS35P1-201ENST00000563400 CYP3A7-CYP3A51PA0A087WV96 503 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM237AA0A1B0GTK4 181 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SERTM2A0A1B0GWG4 89 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 MFSD2BA6NFX1 497 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 HNRNPCL2B2RXH8 293 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 USP17L23D6RBM5 183 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 TLR4O00206 839 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 PLK4O00444 970 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 POLR2DO15514 142 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 DAB1O75553 588 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 HSPA8P11142 646 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 FCER1AP12319 257 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 GNAZP19086 355 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 JAK1P23458 1154 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 CYP3A7P24462 503 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 MAP2K2P36507 400 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 BTDP43251 543 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 VPS41P49754 854 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SMSP52788 366 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 GPC5P78333 572 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 TSTA3Q13630 321 aaPredicted RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 NAB2Q15742 525 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 UGP2Q16851 508 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 VWC2Q2TAL6 325 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 DEFB115Q30KQ5 88 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 GXYLT1Q4G148 440 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 IQCCQ4KMZ1 466 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 LRRC23Q53EV4 343 aaPredicted RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SPATA46Q5T0L3 261 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SERTAD4-AS1Q5TG53 156 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 WBP2NLQ6ICG8 309 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 B3GNT6Q6ZMB0 384 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 C11orf57Q6ZUT1 292 aaPredicted RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF605Q86T29 641 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 STK32CQ86UX6 486 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 TIGD4Q8IY51 512 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 CFAP206Q8IYR0 622 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 BHLHE22Q8NFJ8 381 aaPredicted RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 OR10S1Q8NGN2 331 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 AKR7LQ8NHP1 331 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 NCOA7Q8NI08 942 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 GFM2Q969S9 779 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 AZIN2Q96A70 460 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms