RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FOXP3Q9BZS1 431 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 TRIM31Q9BZY9 425 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 SEMA6CQ9H3T2 930 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 RDH14Q9HBH5 336 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 KCNK4Q9NYG8 393 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 GRHL1Q9NZI5 618 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 TMEM9Q9P0T7 183 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 PDP2Q9P2J9 529 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 FAM8A1Q9UBU6 413 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 ACSL5Q9ULC5 683 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 CDYLQ9Y232 598 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 CFAP20Q9Y6A4 193 aaKnown RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 RPS6KL1Q9Y6S9 549 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 FAM169AQ9Y6X4 670 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 DSPP15924 2871 aaKnown RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 ITPR1Q14643 2758 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 LAMA5O15230 3695 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 IGHV5-10-1A0A0J9YXX1 117 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 LILRA5A6NI73 299 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 IQCF5A8MTL0 148 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 E7ESA3 106 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 PRMT5O14744 637 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 URI1O94763 535 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 CPNE6O95741 557 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 S1PR4O95977 384 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 VIPP01282 170 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 PROS1P07225 676 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 GSTM1P09488 218 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 MTHFD1P11586 935 aaKnown RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 PGAM1P18669 254 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 RPS3P23396 243 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBR1-204ENST00000563239 ACADLP28330 430 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CCKBRP32239 447 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CCR7P32248 378 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 TTPAP49638 278 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 EPHA4P54764 986 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 GSTM4Q03013 218 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CYP4F3Q08477 520 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 RPA4Q13156 261 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 GPR18Q14330 331 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CLPPQ16740 277 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 AARS2Q5JTZ9 985 aaKnown RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 CTSL3PQ5NE16 218 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 HP1BP3Q5SSJ5 553 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 NEPROQ6NW34 567 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 VRK3Q8IV63 474 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 SPNS2Q8IVW8 549 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 DENND6AQ8IWF6 608 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 KRT222Q8N1A0 295 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 MDM1Q8TC05 714 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 JPH3Q8WXH2 748 aaPredicted RBP8.35□□□□□ -1.07
UBR1-204ENST00000563239 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBR1-204ENST00000563239 SH3KBP1Q96B97 665 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 GRAMD1AQ96CP6 724 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 NRTNQ99748 197 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 CARD6Q9BX69 1037 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 SYNDIG1Q9H7V2 258 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 POT1Q9NUX5 634 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 SAMD15Q9P1V8 674 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 DKK4Q9UBT3 224 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 ANAPC5Q9UJX4 755 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 MRFAP1Q9Y605 127 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 MAD1L1Q9Y6D9 718 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 KNTC1P50748 2209 aa8.35□□□□□ -1.07
UBR1-204ENST00000563239 SMAPO00193 183 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 QSOX1O00391 747 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 LIN7AO14910 233 aaPredicted RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 GPC4O75487 556 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 NDUFS3O75489 264 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 FTH1P02794 183 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 MPOP05164 745 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 OR56A5P0C7T3 313 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 TPBGLP0DKB5 382 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 THRAP10827 490 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ITGB6P18564 788 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 OGNP20774 298 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 MPSTP25325 297 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 AOAHP28039 575 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ELK3P41970 407 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 HALP42357 657 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 LSSP48449 732 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 CD151P48509 253 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 LIMK2P53671 638 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 INHBCP55103 352 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ADARP55265 1226 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 GPLD1P80108 840 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 CTBP1Q13363 440 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 BIRC2Q13490 618 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 CRYMQ14894 314 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 C16orf72Q14CZ0 275 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 FASTKD3Q14CZ7 662 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 LONRF1Q17RB8 773 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 WHAMMP3Q1A5X7 153 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms