RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 BTBD3Q9Y2F9 522 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 PRR19A6NJB7 356 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 OR5K4A6NMS3 321 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 POC1B-GALNT4F8VUJ3 575 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 IFRD1O00458 451 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-207ENST00000563109 TRIM38O00635 465 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 SIGLEC6O43699 453 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 GIMD1P0DJR0 217 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 RPL10P27635 214 aaKnown RBP18.44■□□□□ 0.54
RAB40C-207ENST00000563109 MSH2P43246 934 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 PREPP48147 710 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 LIMK2P53671 638 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 SLC12A2P55011 1212 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 HSPA14Q0VDF9 509 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 BIRC2Q13490 618 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 ZNF658BQ4V348 819 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-207ENST00000563109 PLEKHS1Q5SXH7 462 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 WASH2PQ6VEQ5 465 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 DBX2Q6ZNG2 339 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 ZBTB2Q8N680 514 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 AVL9Q8NBF6 648 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 KYQ8NBH2 561 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 WASH6PQ9NQA3 447 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 KLHL42Q9P2K6 505 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 GULP1Q9UBP9 304 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 CDV3Q9UKY7 258 aaKnown RBP18.44■□□□□ 0.54
RAB40C-207ENST00000563109 PCOLCE2Q9UKZ9 415 aa18.44■□□□□ 0.54
RAB40C-207ENST00000563109 ZFHX2Q9C0A1 2572 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 KIR2DS5A0A0G2JLQ3 304 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 A0A0G2JNG1 304 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SLC5A10A0PJK1 596 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 CCDC151A5D8V7 595 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 KIR2DS3K7RE56 304 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 CTIFO43310 598 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SH3BP5O60239 455 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SAT1P21673 171 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 HSD17B3P37058 310 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SKIV2L2P42285 1042 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SERPINB9P50453 376 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 DAB2P98082 770 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 PDAP1Q13442 181 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 KIR2DS5Q14953 304 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 NR0B2Q15466 257 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 NAPRTQ6XQN6 538 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 ALYREFQ86V81 257 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 TRIM48Q8IWZ4 208 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 LILRA3Q8N6C8 439 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 FAM181AQ8N9Y4 354 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SIDT2Q8NBJ9 832 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 MAPK15Q8TD08 544 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 SLC44A1Q8WWI5 657 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 INPP5DQ92835 1189 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 TSPAN17Q96FV3 270 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 CNDP2Q96KP4 475 aaKnown RBP18.43■□□□□ 0.54
RAB40C-207ENST00000563109 GPR21Q99679 349 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 MCMBPQ9BTE3 642 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 EPB41L4BQ9H329 900 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 PSMD13Q9UNM6 376 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 VWA7Q9Y334 891 aa18.43■□□□□ 0.54
RAB40C-207ENST00000563109 A6NCN8 305 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 FAM155BO75949 473 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 LDOC1O95751 146 aaPredicted RBP18.42■□□□□ 0.54
RAB40C-207ENST00000563109 ITGA2BP08514 1039 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CD9P21926 228 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 FDXRP22570 491 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CLCN7P51798 805 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CDKN2DP55273 166 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 POU4F1Q01851 419 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 C14orf28Q4W4Y0 310 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 IYDQ6PHW0 289 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 OGFOD3Q6PK18 319 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 ABRAXAS1Q6UWZ7 409 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 SLC9B2Q86UD5 537 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 PDZD3Q86UT5 571 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 SLC35F3Q8IY50 421 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 MREGQ8N565 214 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 SKA2Q8WVK7 121 aaPredicted RBP18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CXorf40BQ96DE9 158 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 APOLD1Q96LR9 279 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 GPR22Q99680 433 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CDC6Q99741 560 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 OR52A5Q9H2C5 316 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 SLC32A1Q9H598 525 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 PPCSQ9HAB8 311 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 LATS2Q9NRM7 1088 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 FETUBQ9UGM5 382 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 SLC39A10Q9ULF5 831 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 DHRS7Q9Y394 339 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 HEBP2Q9Y5Z4 205 aa18.42■□□□□ 0.54
RAB40C-207ENST00000563109 CABIN1Q9Y6J0 2220 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 NOBOXO60393 691 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 GPC4O75487 556 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 EML2O95834 649 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 SDHBP21912 280 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 CNTFP26441 200 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 ATP5DP30049 168 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 RGS4P49798 205 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 DUSP3P51452 185 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms