RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DNMT3AQ9Y6K1 912 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-205ENST00000562310 SLC5A10A0PJK1 596 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 FAM170BA6NMN3 283 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CHUKO15111 745 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 ITM2AO43736 263 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 LILRB5O75023 590 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 ZNF217O75362 1048 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 LYPLA1O75608 230 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 SEMA4FO95754 770 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 PAK4O96013 591 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 HOXC4P09017 264 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 VCLP18206 1134 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 IGFALSP35858 605 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 KCNC1P48547 511 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CCR5P51681 352 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 PPP2CBP62714 309 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 PPP2CAP67775 309 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CDKL1Q00532 357 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 INPP5AQ14642 412 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 SETDB1Q15047 1291 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 TGFBIQ15582 683 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 PFKFB4Q16877 469 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 ZNF678Q5SXM1 525 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CYHR1Q6ZMK1 362 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 LRRTM4Q86VH4 590 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 SPNS2Q8IVW8 549 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 FLCNQ8NFG4 579 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 C10orf82Q8WW14 230 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 PHF21BQ96EK2 531 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 FAR2Q96K12 515 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CHRDQ9H2X0 955 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 TBC1D17Q9HA65 648 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 MBNL1Q9NR56 388 aaKnown RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 KCNK4Q9NYG8 393 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 TNPO3Q9Y5L0 923 aaKnown RBP14.02□□□□□ -0.17
COMMD4-205ENST00000562310 USH1CQ9Y6N9 552 aa14.02□□□□□ -0.17
COMMD4-205ENST00000562310 CACNB4O00305 520 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 TOR1BO14657 336 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 FFAR2O15552 330 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 RPS17P08708 135 aaKnown RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 ZNF8P17098 575 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 CYP2A7P20853 494 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 KIAA1024LP59773 190 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 RPA4Q13156 261 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 FZD5Q13467 585 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 NUMA1Q14980 2115 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 ZNF658BQ4V348 819 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 ARL13AQ5H913 290 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 ANKS6Q68DC2 871 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 ANO7Q6IWH7 933 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 TTC23LQ6PF05 361 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 SLC22A15Q8IZD6 547 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 GJD3Q8N144 294 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 TCAIMQ8N3R3 496 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 SPEM1Q8N4L4 309 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 OXR1Q8N573 874 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 UBTD2Q8WUN7 234 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 STON2Q8WXE9 905 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 FOXJ1Q92949 421 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 CLDN23Q96B33 292 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 FOPNLQ96NB1 174 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 SLC12A9Q9BXP2 914 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 FOXQ1Q9C009 403 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 C20orf27Q9GZN8 174 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 VTI1BQ9UEU0 232 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 TSR3Q9UJK0 312 aaKnown RBP14.01□□□□□ -0.17
COMMD4-205ENST00000562310 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 STK38LQ9Y2H1 464 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 PLXND1Q9Y4D7 1925 aa14.01□□□□□ -0.17
COMMD4-205ENST00000562310 MGAT4DA6NG13 374 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 C10orf142B7Z368 130 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 FPGTO14772 594 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 KMOO15229 486 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 LATO43561 262 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 DCTN3O75935 186 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 SUPT7LO94864 414 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 APBB3O95704 486 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 ALOX15P16050 662 aaPredicted RBP14□□□□□ -0.17
COMMD4-205ENST00000562310 HNRNPA2B1P22626 353 aaKnown RBP14□□□□□ -0.17
COMMD4-205ENST00000562310 KELP23276 732 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 EEF1DP29692 281 aaKnown RBP14□□□□□ -0.17
COMMD4-205ENST00000562310 AKT2P31751 481 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 ARRB2P32121 409 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 ACSL1P33121 698 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 MAGEA9P43362 315 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 HK3P52790 923 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 ARFIP2P53365 341 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 AP1S2P56377 157 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 PCBP2Q15366 365 aaKnown RBP eCLIP14□□□□□ -0.17
COMMD4-205ENST00000562310 UNC50Q53HI1 259 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 SULT1C3Q6IMI6 304 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 DOK6Q6PKX4 331 aa14□□□□□ -0.17
COMMD4-205ENST00000562310 UBE2R2Q712K3 238 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms