RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SIRPGQ9P1W8 387 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 GNPTGQ9UJJ9 305 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 FBXO5Q9UKT4 447 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 F8W8V4 182 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 H3BMM5 538 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 OPA1O60313 960 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 TCEA3O75764 348 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 SLCO2B1O94956 709 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ERVK-10P10266 1014 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ACADLP28330 430 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ATP5DP30049 168 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 CCR7P32248 378 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 SLC19A1P41440 591 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 PDX1P52945 283 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 EPHA4P54764 986 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 GPX6P59796 221 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 TIAL1Q01085 375 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDH1-204ENST00000562118 CUL1Q13616 776 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 HSP90AA5PQ58FG0 334 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ZNF549Q6P9A3 640 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 RASGRP3Q8IV61 690 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 DCBLD1Q8N8Z6 715 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ZFPM2Q8WW38 1151 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 KCNJ9Q92806 393 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 RMDN2Q96LZ7 410 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 SLC40A1Q9NP59 571 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 LRIT1Q9P2V4 623 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 DNAJC16Q9Y2G8 782 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 COMMD10Q9Y6G5 202 aa13.14□□□□□ -0.31
CDH1-204ENST00000562118 ADAMTS20P59510 1910 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 A0A1W2PQM1 296 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 PFDN6O15212 129 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 NDUFS3O75489 264 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 MTHFD1P11586 935 aaKnown RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 RPL10P27635 214 aaKnown RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 CLCN7P51798 805 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 MPP1Q00013 466 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 HHEXQ03014 270 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 CTBP1Q13363 440 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 RPE65Q16518 533 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 PDZD3Q86UT5 571 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 SLC26A11Q86WA9 606 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 TMPRSS12Q86WS5 348 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 SLC22A15Q8IZD6 547 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 PANX3Q96QZ0 392 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 INSM2Q96T92 566 aaPredicted RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 OSGEPL1Q9H4B0 414 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 LRRC4CQ9HCJ2 640 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 PDP2Q9P2J9 529 aa13.13□□□□□ -0.31
CDH1-204ENST00000562118 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
CDH1-204ENST00000562118 IGHV1OR21-1A0A087WYE8 117 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 TCRBV9S1A1TA0A576 114 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 FAM159BA6NKW6 160 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 OR52A4PA6NMU1 304 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 CASC3O15234 703 aaKnown RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 B4GAT1O43505 415 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 SPAG6O75602 509 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 AHSGP02765 367 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 PKMP14618 531 aaKnown RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 PDHA2P29803 388 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 MAGEA4P43358 317 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 CARSP49589 748 aaKnown RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 GPLD1P80108 840 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 MGAT5Q09328 741 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 HP1BP3Q5SSJ5 553 aaPredicted RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 TMEM26Q6ZUK4 368 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 GABPB2Q8TAK5 448 aaPredicted RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 SH3KBP1Q96B97 665 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 FMO2Q99518 471 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 AARSD1Q9BTE6 412 aaKnown RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 TSSK1BQ9BXA7 367 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 TXLNGYQ9BZA5 131 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 WWP1Q9H0M0 922 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 EPB41L1Q9H4G0 881 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 FBXO6Q9NRD1 293 aaPredicted RBP13.12□□□□□ -0.31
CDH1-204ENST00000562118 SMYD2Q9NRG4 433 aa13.12□□□□□ -0.31
CDH1-204ENST00000562118 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 PDZK1P1A8MUH7 402 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 D6RAR5 112 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms