RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 KEAP1Q14145 624 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 SELPLGQ14242 412 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 CCL14Q16627 93 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 C6orf136Q5SQH8 315 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 MARCH8Q5T0T0 291 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 ZNF549Q6P9A3 640 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 RALGPS2Q86X27 583 aaPredicted RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 RTL3Q8N8U3 475 aaKnown RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 OR2T12Q8NG77 320 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 ZNF583Q96ND8 569 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 AARSD1Q9BTE6 412 aaKnown RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 BTBD2Q9BX70 525 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 SLIRPQ9GZT3 109 aaKnown RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 KAT8Q9H7Z6 458 aaKnown RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 ACTR8Q9H981 624 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 SEMA4BQ9NPR2 832 aaPredicted RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 PDGFCQ9NRA1 345 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 FLRT1Q9NZU1 646 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 MARCH4Q9P2E8 410 aaPredicted RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 POU2F3Q9UKI9 436 aa18.38■□□□□ 0.53
BBS4-204ENST00000562084 MAGED1Q9Y5V3 778 aaPredicted RBP18.38■□□□□ 0.53
BBS4-204ENST00000562084 ILVBLA1L0T0 632 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 LRRC14BA6NHZ5 514 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 RRN3P2A6NIE6 340 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 SNPHO15079 494 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 RETP07949 1114 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 PCNAP12004 261 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 PIGFQ07326 219 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 PLD3Q8IV08 490 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 LYSMD2Q8IV50 215 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 ARL10Q8N8L6 244 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 FNDC5Q8NAU1 212 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 TBC1D20Q96BZ9 403 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 ZNF486Q96H40 463 aaPredicted RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 CSNK1G1Q9HCP0 422 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 H3BRB1 525 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 CD3EAPO15446 510 aaKnown RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 HS6ST1O60243 411 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 DCTP40126 519 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 SLC35A2P78381 396 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 RAD51Q06609 339 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 FAM219BQ5XKK7 198 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 SPESP1Q6UW49 350 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 KDELC2Q7Z4H8 507 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 SYVN1Q86TM6 617 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 DCP2Q8IU60 420 aaKnown RBP18.37■□□□□ 0.53
BBS4-204ENST00000562084 GABARAPL1Q9H0R8 117 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 NPAP1Q9NZP6 1156 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 KLQ9UEF7 1012 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 CDH9Q9ULB4 789 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 CRYL1Q9Y2S2 319 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 PCDHGA10Q9Y5H3 936 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 HTTP42858 3142 aa18.37■□□□□ 0.53
BBS4-204ENST00000562084 ANKRD36A6QL64 1941 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 CENPBD1B2RD01 187 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 LSM1O15116 133 aaKnown RBP18.36■□□□□ 0.53
BBS4-204ENST00000562084 IRAK2O43187 625 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 NOBOXO60393 691 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 GPR32O75388 356 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 ARSDP51689 593 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 IRF5Q13568 498 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 CLCA4Q14CN2 919 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 SF3B4Q15427 424 aaKnown RBP eCLIP18.36■□□□□ 0.531e-7■■■■□ 25.5
BBS4-204ENST00000562084 NPTX1Q15818 432 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 NOMO2Q5JPE7 1267 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 GPRIN3Q6ZVF9 776 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 ZNF548Q8NEK5 533 aaPredicted RBP18.36■□□□□ 0.53
BBS4-204ENST00000562084 PPM1MQ96MI6 270 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 ZNF382Q96SR6 550 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 C17orf80Q9BSJ5 609 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 SIK2Q9H0K1 926 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 PIF1Q9H611 641 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 LIMD1Q9UGP4 676 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 ADGRE2Q9UHX3 823 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 VPS51Q9UID3 782 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 PCTPQ9UKL6 214 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 TIMM22Q9Y584 194 aa18.36■□□□□ 0.53
BBS4-204ENST00000562084 LDB2O43679 373 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 RPP40O75818 363 aaKnown RBP18.35■□□□□ 0.53
BBS4-204ENST00000562084 FKBP9O95302 570 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 DARSP14868 501 aaKnown RBP18.35■□□□□ 0.53
BBS4-204ENST00000562084 POLR2EP19388 210 aaKnown RBP18.35■□□□□ 0.53
BBS4-204ENST00000562084 CCR1P32246 355 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 SOX11P35716 441 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 PRMT2P55345 433 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 MTPNP58546 118 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 VBP1P61758 197 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 IL5RAQ01344 420 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 TYSND1Q2T9J0 566 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 LRIT3Q3SXY7 679 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 PAGE2Q7Z2X7 111 aa18.35■□□□□ 0.53
BBS4-204ENST00000562084 LDB1Q86U70 411 aaPredicted RBP18.35■□□□□ 0.53
BBS4-204ENST00000562084 NKAPQ8N5F7 415 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms