RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MAP7D1Q3KQU3 841 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 GRAMD1BQ3KR37 738 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 METTL2BQ6P1Q9 378 aaKnown RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 IL27RAQ6UWB1 636 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 GRASPQ7Z6J2 395 aaPredicted RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 MILR1Q7Z6M3 343 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 NAT16Q8N8M0 369 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 FNDC5Q8NAU1 212 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 PHOSPHO2Q8TCD6 241 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 FRS2Q8WU20 508 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 HERVK_113Q902F9 699 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 GATA6Q92908 595 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 SLC45A3Q96JT2 553 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 MRGPRX3Q96LB0 322 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 HEPHQ9BQS7 1158 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 C1orf50Q9BV19 199 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 CD244Q9BZW8 370 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 CXorf56Q9H5V9 222 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 COPS7BQ9H9Q2 264 aaPredicted RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 IL1RL2Q9HB29 575 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TMEM45AQ9NWC5 275 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ZIM2Q9NZV7 527 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 OPTCQ9UBM4 332 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ZMYM5Q9UJ78 669 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TMPRSS11EQ9UL52 423 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 HCFC2Q9Y5Z7 792 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 LINC01553A4QN01 128 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 A6NHS1 94 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 NME4O00746 187 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 KATNA1O75449 491 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 SLC22A3O75751 556 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 OR56A5P0C7T3 313 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ZNF30P17039 623 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 CEBPBP17676 345 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 HMOX2P30519 316 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 VIPR1P32241 457 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 UFM1P61960 85 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 CAMK1Q14012 370 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TMEM154Q6P9G4 183 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 LILRA2Q8N149 483 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 CYB5D2Q8WUJ1 264 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 LRRC58Q96CX6 371 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TEX37Q96LM6 180 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ABCG8Q9H221 673 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 HEBP1Q9NRV9 189 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ANGPTL3Q9Y5C1 460 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 TCRBV3S1A0A5B6 114 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 MAGEA13PA6NCF6 341 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 TTC34A8MYJ7 566 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 K7EPI3 171 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 EEDO75530 441 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 UQCRBP14927 111 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 MSH3P20585 1137 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 CCR7P32248 378 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 RHDQ02161 417 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SPRED2Q7Z698 418 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 CATSPER1Q8NEC5 780 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SORCS1Q8WY21 1168 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ING5Q8WYH8 240 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 DUS3LQ96G46 650 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 PKP2Q99959 881 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SPATA16Q9BXB7 569 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SMOXQ9NWM0 555 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 CD84Q9UIB8 345 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 FAM234BA2RU67 622 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ASPDHA6ND91 283 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 C5orf67F2Z3F1 127 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ZNF197O14709 1029 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 LSM1O15116 133 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 DNAJA2O60884 412 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 LEFTY1O75610 366 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 STAMBPO95630 424 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 HSPA8P11142 646 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 AOAHP28039 575 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 NNMTP40261 264 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 GDF5P43026 501 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 POLR2JP52435 117 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 DCDC1P59894 354 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 EMX2Q04743 252 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 CAPRIN1Q14444 709 aaKnown RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 GBX1Q14549 363 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 CDKL4Q5MAI5 379 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 IL23RQ5VWK5 629 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ICA1LQ8NDH6 482 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ADCY4Q8NFM4 1077 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 ZNF707Q96C28 371 aaPredicted RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 DCUN1D1Q96GG9 259 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 BTBD9Q96Q07 612 aa9.63□□□□□ -0.87
SMG1-205ENST00000561947 MYCBPQ99417 103 aaPredicted RBP9.63□□□□□ -0.87
SMG1-205ENST00000561947 CMTM6Q9NX76 183 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms