RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 NMRK1Q9NWW6 199 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 THG1LQ9NWX6 298 aaKnown RBP12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 ELOVL2Q9NXB9 296 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 OPTCQ9UBM4 332 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 TRPS1Q9UHF7 1281 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 TMPRSS11EQ9UL52 423 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 ASB1Q9Y576 335 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 TIMM22Q9Y584 194 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 ANGPTL3Q9Y5C1 460 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 GPR45Q9Y5Y3 372 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 PTGDR2Q9Y5Y4 395 aa12.43□□□□□ -0.42
AC055717.2-201ENST00000561864 COL4A3Q01955 1670 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 EDDM13A0A1B0GTR0 161 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 C16orf96A6NNT2 1141 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 NR5A2O00482 541 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CFLARO15519 480 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CTSLP07711 333 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 ANXA5P08758 320 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 ATP6V1C1P21283 382 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 PRDX3P30048 256 aaKnown RBP12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CCR7P32248 378 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 VIPR2P41587 438 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 MAGEA10P43363 369 aaPredicted RBP12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 NRIP1P48552 1158 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 HSPA7P48741 367 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 FOXM1Q08050 763 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 TRAF3Q13114 568 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 FLOT2Q14254 428 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 PHKG1Q16816 387 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 SPATS1Q496A3 300 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 FBXO48Q5FWF7 155 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 LRRC73Q5JTD7 316 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 LDLRAP1Q5SW96 308 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 HENMT1Q5T8I9 393 aaKnown RBP12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 LETMD1Q6P1Q0 360 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 ZFP1Q6P2D0 407 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 PAOXQ6QHF9 649 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 LRRC70Q7Z2Q7 622 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 TECPR1Q7Z6L1 1165 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 DHDDSQ86SQ9 333 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 KBTBD6Q86V97 674 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 C12orf40Q86WS4 652 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 FUNDC1Q8IVP5 155 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CDYL2Q8N8U2 506 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 OR52B6Q8NGF0 335 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 METTL6Q8TCB7 284 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 NRG4Q8WWG1 115 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 OR8D1Q8WZ84 308 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 ZNF570Q96NI8 536 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 FAM83CQ9BQN1 747 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 TRIM54Q9BYV2 358 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 IPPKQ9H8X2 491 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 ZIM2Q9NZV7 527 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 CROTQ9UKG9 612 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
AC055717.2-201ENST00000561864 DYTNA2CJ06 578 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 PABPN1LA6NDY0 278 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 H0Y858 1186 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 ANGPT2O15123 496 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 KATNA1O75449 491 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 BCAS2O75934 225 aaPredicted RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 SORBS2O94875 1100 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 GUCA1CO95843 209 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 CAPN1P07384 714 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 EBLN1P0CF75 366 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 ITGB7P26010 798 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 HMOX2P30519 316 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 GGT5P36269 586 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 DPP6P42658 865 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 MAPK9P45984 424 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 HNMTP50135 292 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 GTF2A1P52655 376 aaPredicted RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 TRAP1Q12931 704 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 KCNC3Q14003 757 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 GAB4Q2WGN9 574 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 HNRNPA1L2Q32P51 320 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 ATP6AP1LQ52LC2 224 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 FNDC3BQ53EP0 1204 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 C9orf50Q5SZB4 431 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 FAM109BQ6ICB4 259 aaPredicted RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 Q6ZVL8 140 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 UBE2R2Q712K3 238 aaPredicted RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 ZNF765Q7L2R6 523 aa12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 PARS2Q7L3T8 475 aaKnown RBP12.41□□□□□ -0.42
AC055717.2-201ENST00000561864 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms