RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 POU6F1Q14863 301 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 PLCL1Q15111 1095 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 DUS1LQ6P1R4 473 aaKnown RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 TAB3Q8N5C8 712 aaPredicted RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 ZFPM2Q8WW38 1151 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ULK4Q96C45 1275 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ELMO2Q96JJ3 720 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 SLC45A3Q96JT2 553 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 C12orf66Q96MD2 445 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 COPS8Q99627 209 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ULBP3Q9BZM4 244 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 LRRC40Q9H9A6 602 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 GPN2Q9H9Y4 310 aaPredicted RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 STARD5Q9NSY2 213 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 NLE1Q9NVX2 485 aaPredicted RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 IL17BQ9UHF5 180 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 IGLV3-16A0A075B6K0 115 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 TRBV5-4A0A0C4DH59 114 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 OR5K3A6NET4 321 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 MROH6A6NGR9 719 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 H7C0S8 307 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SPAG6O75602 509 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 AP2A1O95782 977 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SLC35G4P0C7Q5 338 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 FGF5P12034 268 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 FOLR1P15328 257 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 F8A1P23610 371 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 ACRV1P26436 265 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 STAT5AP42229 794 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 PRLHRP49683 370 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 NFATC3Q12968 1075 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 MAP7Q14244 749 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 KCNAB1Q14722 419 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 P3H1Q32P28 736 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 GPR33Q49SQ1 333 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 ZNF658BQ4V348 819 aaPredicted RBP10.04□□□□□ -0.8
CLK3-205ENST00000561673 ZRANB3Q5FWF4 1079 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 KLHL35Q6PF15 583 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 BORAQ6PGQ7 559 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 C6orf15Q6UXA7 325 aaPredicted RBP10.04□□□□□ -0.8
CLK3-205ENST00000561673 TAS2R42Q7RTR8 314 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SERPINA9Q86WD7 417 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 RASGRP3Q8IV61 690 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 PIANPQ8IYJ0 282 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 ESX1Q8N693 406 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 STYXQ8WUJ0 223 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 HEXDCQ8WVB3 486 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 KIAA1143Q96AT1 154 aaPredicted RBP10.04□□□□□ -0.8
CLK3-205ENST00000561673 CDKN2AIPNLQ96HQ2 116 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SLC41A2Q96JW4 573 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 MAP3K3Q99759 626 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 CCM2Q9BSQ5 444 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 EFHD1Q9BUP0 239 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 KIR3DX1Q9H7L2 352 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 HRASLS2Q9NWW9 162 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 GEMIN8Q9NWZ8 242 aaKnown RBP10.04□□□□□ -0.8
CLK3-205ENST00000561673 ZDHHC3Q9NYG2 299 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SLC24A2Q9UI40 661 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 GUCA1BQ9UMX6 200 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
CLK3-205ENST00000561673 SPENQ96T58 3664 aaKnown RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 C17orf113A0A1B0GUU1 675 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 UBA6A0AVT1 1052 aaPredicted RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 OR6C74A6NCV1 312 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 CFAP99D6REC4 459 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 J3QKU1 62 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 PSMD3O43242 534 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 LIASO43766 372 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 KIAA0754O94854 1291 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 PRKAR1AP10644 381 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 SFTPCP11686 197 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 PSMA3P25788 255 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 STIP1P31948 543 aaKnown RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 SEPT6Q14141 434 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 KRT33BQ14525 404 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 OASLQ15646 514 aaKnown RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLK3-205ENST00000561673 CERS6Q6ZMG9 384 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 PPP1R3BQ86XI6 285 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 CLDN19Q8N6F1 224 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 SIDT2Q8NBJ9 832 aaKnown RBP10.03□□□□□ -0.8
CLK3-205ENST00000561673 OR4E2Q8NGC2 313 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 OR52K1Q8NGK4 314 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 HM13Q8TCT9 377 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 UBXN4Q92575 508 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 TSGA10Q9BZW7 698 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 ETNK1Q9HBU6 452 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 HEBP2Q9Y5Z4 205 aa10.03□□□□□ -0.8
CLK3-205ENST00000561673 MRPS18BQ9Y676 258 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms