RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	ITM2B	Q9Y287	266 aa		7.42	□□□□□ -1.22
TPM1-231	ENST00000561395	STON1	Q9Y6Q2	735 aa		7.42	□□□□□ -1.22
TPM1-231	ENST00000561395	ZNF462	Q96JM2	2506 aa		7.42	□□□□□ -1.22
TPM1-231	ENST00000561395	PIKFYVE	Q9Y2I7	2098 aa		7.42	□□□□□ -1.22
TPM1-231	ENST00000561395	HECTD1	Q9ULT8	2610 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	CCDC189	A1A4V9	331 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395		A8MT66	165 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395		E5RI56	91 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395		F8W8V4	182 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ARHGAP33	O14559	1287 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	AREL1	O15033	823 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ITM2A	O43736	263 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	LYPLA1	O75608	230 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	C1QL1	O75973	258 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	TSPAN12	O95859	305 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ADH1B	P00325	375 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	GM2A	P17900	193 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	P2RY2	P41231	377 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	SKIV2L2	P42285	1042 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	NSG1	P42857	185 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	LIG3	P49916	1009 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ATXN3	P54252	364 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	SEC13	P55735	322 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ABCE1	P61221	599 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ATP6V0D1	P61421	351 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	NFKB2	Q00653	900 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	B4GALNT1	Q00973	533 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ASPH	Q12797	758 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	IFT88	Q13099	833 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	CAMK2G	Q13555	558 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RCN2	Q14257	317 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	OR4D1	Q15615	310 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	TMEM52B	Q4KMG9	183 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	GPRC6A	Q5T6X5	926 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	FAM46C	Q5VWP2	391 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	UGT3A1	Q6NUS8	523 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	FBXL19	Q6PCT2	694 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395		Q6ZVL8	140 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ERN2	Q76MJ5	926 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ZNF765	Q7L2R6	523 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	PIP4P1	Q86T03	277 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ISCA2	Q86U28	154 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	MMAA	Q8IVH4	418 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	SLC22A9	Q8IVM8	553 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	NRSN1	Q8IZ57	195 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	TRAM1L1	Q8N609	369 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RFWD2	Q8NHY2	731 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RHEBL1	Q8TAI7	183 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	LKAAEAR1	Q8TD35	194 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	PPP4R1	Q8TF05	950 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	KIAA1191	Q96A73	305 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	CCDC126	Q96EE4	140 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	DTD2	Q96FN9	168 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	THOC1	Q96FV9	657 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RMDN2	Q96LZ7	410 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	COQ10A	Q96MF6	247 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ATOH8	Q96SQ7	321 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	SORT1	Q99523	831 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	COPS8	Q99627	209 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	ZSCAN5A	Q9BUG6	496 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	WRAP53	Q9BUR4	548 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	GATA5	Q9BWX5	397 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RSPH9	Q9H1X1	276 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	TFB2M	Q9H5Q4	396 aa	Known RBP	7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	DYRK4	Q9NR20	520 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	GALP	Q9UBC7	116 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	CD84	Q9UIB8	345 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	TMPRSS11E	Q9UL52	423 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	RAX	Q9Y2V3	346 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	DHRS7	Q9Y394	339 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	PRSS21	Q9Y6M0	314 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	USH1C	Q9Y6N9	552 aa		7.41	□□□□□ -1.22
TPM1-231	ENST00000561395	NPEPPSL1	A6NEC2	478 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	NEMP2	A6NFY4	417 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	CCT8L1P	A6NM43	557 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	IQCF5	A8MTL0	148 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	PLK4	O00444	970 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	WNT9A	O14904	365 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	MID1	O15344	667 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	NPHS1	O60500	1241 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	RNASEH1	O60930	286 aa	Known RBP	7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	KERA	O60938	352 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	SMIM24	O75264	130 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	IPO13	O94829	963 aa	Known RBP	7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	EGF	P01133	1207 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	C6	P13671	934 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	PLA2G2A	P14555	144 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	CHRM3	P20309	590 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	NTSR1	P30989	418 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	DRD3	P35462	400 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	SERPINB5	P36952	375 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	WAS	P42768	502 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	NAGLU	P54802	743 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	HNRNPH2	P55795	449 aa	Known RBP	7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	IL2	P60568	153 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	CNTN1	Q12860	1018 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	ACOX1	Q15067	660 aa		7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	TSN	Q15631	228 aa	Known RBP	7.4	□□□□□ -1.22
TPM1-231	ENST00000561395	CST6	Q15828	149 aa		7.4	□□□□□ -1.22

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