RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PPP1R2P41236 205 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 STX17P56962 302 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 DCDP81605 110 aaKnown RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 SLC10A7Q0GE19 358 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 MYBPHQ13203 477 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 PNOCQ13519 176 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 PKP1Q13835 747 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 EXOC3L4Q17RC7 722 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 ZNF648Q5T619 568 aaPredicted RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 HENMT1Q5T8I9 393 aaKnown RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 C1orf189Q5VU69 101 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 KLHL10Q6JEL2 608 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 ARHGAP36Q6ZRI8 547 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 CREBRFQ8IUR6 639 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 GPR150Q8NGU9 434 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 SUN3Q8TAQ9 357 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 PROKR1Q8TCW9 393 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 PIH1D2Q8WWB5 315 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 CENPIQ92674 756 aaPredicted RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 SDCCAG3Q96C92 435 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 GSDMAQ96QA5 445 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 MGME1Q9BQP7 344 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 SELENOOQ9BVL4 669 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 SPATA16Q9BXB7 569 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 AP1M1Q9BXS5 423 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 TXLNGQ9NUQ3 528 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 SLC23A2Q9UGH3 650 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 FZD10Q9ULW2 581 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 MEMO1Q9Y316 297 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 C1orf232A0A0U1RR37 186 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 GSAPA4D1B5 854 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 OR6C74A6NCV1 312 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 MATN2O00339 956 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 FOXN3O00409 490 aaPredicted RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 ZNF202O95125 648 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 CLDN7O95471 211 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 PNMA6AP0CW24 399 aaPredicted RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 KRT3P12035 628 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 CA4P22748 312 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 IL4RP24394 825 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 SPINT3P49223 89 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 KPNA2P52292 529 aaKnown RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 DGKQP52824 942 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 MAXP61244 160 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 APBA1Q02410 837 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ITKQ08881 620 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 DMPKQ09013 629 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 XRCC4Q13426 336 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 GTF2H3Q13889 308 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 SLC9A5Q14940 896 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 TUBB8Q3ZCM7 444 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ZNF789Q5FWF6 425 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ZFYVE27Q5T4F4 411 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 FBXO38Q6PIJ6 1188 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 TRAPPC5Q8IUR0 188 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 TAB3Q8N5C8 712 aaPredicted RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 DNAAF3Q8N9W5 541 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ACBD4Q8NC06 268 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 JOSD2Q8TAC2 188 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ZFPM2Q8WW38 1151 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ALPK1Q96QP1 1244 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 SMR3AQ99954 134 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 TREX2Q9BQ50 279 aaPredicted RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 TMEM121Q9BTD3 319 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ANP32EQ9BTT0 268 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 C1GALT1Q9NS00 363 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 IMP3Q9NV31 184 aaKnown RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 SEPT11Q9NVA2 429 aaKnown RBP9.25□□□□□ -0.93
HERC1-210ENST00000560897 IRAK4Q9NWZ3 460 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 STMN3Q9NZ72 180 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 KCNN3Q9UGI6 736 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 ST6GALNAC2Q9UJ37 374 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 DNAJC12Q9UKB3 198 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 AP1M2Q9Y6Q5 423 aa9.25□□□□□ -0.93
HERC1-210ENST00000560897 RGSL1A5PLK6 1076 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 CHUKO15111 745 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 PRAMEF2O60811 474 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 CDK14O94921 469 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 FGFR1OPO95684 399 aaKnown RBP9.24□□□□□ -0.93
HERC1-210ENST00000560897 HEXAP06865 529 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 UMODP07911 640 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 PDHA1P08559 390 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 INHBBP09529 407 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 CBSLP0DN79 551 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 HLA-DPA1P20036 260 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 UGT1A4P22310 534 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 MMP11P24347 488 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 MST1P26927 711 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 CBSP35520 551 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 MMP13P45452 471 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 LMAN1P49257 510 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 TNFSF10P50591 281 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 NOMO3P69849 1222 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 ADAM8P78325 824 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 RPE65Q16518 533 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 ANKRD20A8PQ5CZ79 823 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms