RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 RPS6KA1Q15418 735 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 CCDC142Q17RM4 750 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 HSDL1Q3SXM5 330 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 CFAP221Q4G0U5 840 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 SLC9B1Q4ZJI4 515 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 RBM20Q5T481 1227 aaKnown RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 TTC19Q6DKK2 380 aaPredicted RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 TTI2Q6NXR4 508 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 KLHL35Q6PF15 583 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 CXCL17Q6UXB2 119 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 KIAA1324Q6UXG2 1013 aaKnown RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 WDR49Q8IV35 697 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 URGCPQ8TCY9 931 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 ZNF483Q8TF39 744 aaPredicted RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 NPIPB3Q92617 1050 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 MRPL38Q96DV4 380 aaKnown RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 C19orf60Q96EN9 201 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 FAR2Q96K12 515 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 FAM20AQ96MK3 541 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 NUDCD1Q96RS6 583 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 FIZ1Q96SL8 496 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 PNKPQ96T60 521 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 CPPED1Q9BRF8 314 aaPredicted RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 C17orf80Q9BSJ5 609 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 ZNF577Q9BSK1 485 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 VN1R3Q9BXE9 311 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 C1QTNF3Q9BXJ4 246 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 KCNMB3Q9NPA1 279 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 KCNK9Q9NPC2 374 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 STEAP1Q9UHE8 339 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 DDX25Q9UHL0 483 aaKnown RBP6.09□□□□□ -1.43
USP8-210ENST00000560379 CD207Q9UJ71 328 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 SSX2IPQ9Y2D8 614 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 NFS1Q9Y697 457 aa6.09□□□□□ -1.43
USP8-210ENST00000560379 COL1A2P08123 1366 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 LAMA3Q16787 3333 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 IGKV6D-21A0A0A0MT36 114 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 LOC100653049A0A140TA62 436 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 FAM237BA0A1B0GVD1 139 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 FRMD3A2A2Y4 597 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 ACOD1A6NK06 481 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 BTBD18B2RXH4 712 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 H3BQV1 296 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 HAS3O00219 553 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 LAD1O00515 517 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 MSH4O15457 936 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 NKX2-8O15522 239 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 BUB1O43683 1085 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 CACNG3O60359 315 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 ERLIN1O75477 346 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 KRT34O76011 436 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 SUN1O94901 812 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 SIX3O95343 332 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 SMC2O95347 1197 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 PRAMEF12O95522 483 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 TDP2O95551 362 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 DDAH2O95865 285 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 ONECUT2O95948 504 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 BMP15O95972 392 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 EIF2S1P05198 315 aaKnown RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 COX7A2P14406 83 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 ZNF20P17024 532 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 CDH2P19022 906 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 SP100P23497 879 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 AVPR2P30518 371 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 S100A5P33763 92 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 MSX2P35548 267 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 TAGLN2P37802 199 aaKnown RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 PBX3P40426 434 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 WNT5AP41221 380 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 CCR10P46092 362 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 OR1G1P47890 313 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 BMXP51813 675 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 JAK3P52333 1124 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 EIF3BP55884 814 aaKnown RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 TIRAPP58753 221 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 FAM189BP81408 668 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 PMP22Q01453 160 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 SP2Q02086 613 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 GOLGA8FQ08AF8 430 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 TMEM115Q12893 351 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 LRRC26Q2I0M4 334 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 HYAL4Q2M3T9 481 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 LETM2Q2VYF4 491 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 COLEC12Q5KU26 742 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 HEPHL1Q6MZM0 1159 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 MIS18BP1Q6P0N0 1132 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 PAPD4Q6PIY7 484 aaKnown RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 SLC39A5Q6ZMH5 540 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 ERN2Q76MJ5 926 aaKnown RBP6.08□□□□□ -1.44
USP8-210ENST00000560379 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
USP8-210ENST00000560379 HOOK3Q86VS8 718 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms