RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CMTM8Q8IZV2 173 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TMEM150CB9EJG8 249 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RB1P06400 928 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 ITGA3P26006 1051 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TAS2R50P59544 299 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TBC1D25Q3MII6 688 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 BROXQ5VW32 411 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TBC1D21Q8IYX1 336 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RHOBTB2Q9BYZ6 727 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 ACP5P13686 325 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF792Q3KQV3 632 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 SAPCD2Q86UD0 394 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RASSF5Q8WWW0 418 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 INPPL1O15357 1258 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 DDX3YO15523 660 aaKnown RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 OR5F1O95221 314 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 F2P00734 622 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 MED22Q15528 200 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ERICH5Q6P6B1 374 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZMIZ2Q8NF64 920 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 GPER1Q99527 375 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 BTBD1Q9H0C5 482 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 UBR2Q8IWV8 1755 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SNPHO15079 494 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 IL7RP16871 459 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 TTKP33981 857 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 OC90Q02509 493 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 PIK3C3Q8NEB9 887 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 EDDM13A0A1B0GTR0 161 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 COL6A1P12109 1028 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 CYP4B1P13584 511 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 TYRP14679 529 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 NDUFS1P28331 727 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZYG11AQ6WRX3 759 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 MPP5Q8N3R9 675 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZSCAN5AQ9BUG6 496 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 CLCA3PQ9Y6N3 262 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 B4DGG1 531 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 CCR8P51685 355 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SYPL2Q5VXT5 272 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ISLR2Q6UXK2 745 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SIDT2Q8NBJ9 832 aaKnown RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 PIH1D2Q8WWB5 315 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 CKLFQ9UBR5 152 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 PCSK2P16519 638 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 OMPP47874 163 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 LRRC32Q14392 662 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF366Q8N895 744 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 TTLQ8NG68 377 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 MTERF1Q99551 399 aaKnown RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 COQ4Q9Y3A0 265 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 RALGPS2Q86X27 583 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 COX18Q8N8Q8 333 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 KCT2Q8NC54 265 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 RIT1Q92963 219 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 EFHD2Q96C19 240 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-208ENST00000560371 EBPLQ9BY08 206 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 SSR3Q9UNL2 185 aa13.28□□□□□ -0.28
TRAF3-208ENST00000560371 NINQ8N4C6 2090 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 KERAO60938 352 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 PRKCGP05129 697 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 AGXTP21549 392 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 RYKP34925 604 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 HSD17B2P37059 387 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 PPIDQ08752 370 aaKnown RBP13.27□□□□□ -0.28
TRAF3-208ENST00000560371 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 KRT74Q7RTS7 529 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 AGAP2Q99490 1192 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 RTKNQ9BST9 563 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 MINDY3Q9H8M7 445 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 NOCTQ9UK39 431 aaKnown RBP13.27□□□□□ -0.28
TRAF3-208ENST00000560371 IKZF2Q9UKS7 526 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 CDC14AQ9UNH5 594 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 ELOVL7A1L3X0 281 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 CHRNB2P17787 502 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 AAK1Q2M2I8 961 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 GPR33Q49SQ1 333 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms