RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 KIR3DL1P43629 444 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 BATFQ16520 125 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 TMPRSS4Q9NRS4 437 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ERVK-18Q9QC07 812 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PCDHGC3Q9UN70 934 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 IGSF1Q8N6C5 1336 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 IFNA5P01569 189 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 VAMP1P23763 118 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 WDSUB1Q8N9V3 476 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 CFL2Q9Y281 166 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 RAB36O95755 333 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 AHCYP23526 432 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 POM121L1PQ3SYA9 428 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ERVK-11Q9UQG0 969 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 A8MVJ9 347 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 NUDT7P0C024 238 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SIM2Q14190 667 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR52J3Q8NH60 311 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 TATDN2Q93075 761 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 PBDC1Q9BVG4 233 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 WDR62O43379 1518 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 POLR2HP52434 150 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SULT2A1Q06520 285 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 COL28A1Q2UY09 1125 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 GK5Q6ZS86 529 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 PLEKHH3Q7Z736 793 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 TAS1R2Q8TE23 839 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR12D3Q9UGF7 316 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 E7EQ34 232 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ACOX3O15254 700 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ASGR1P07306 291 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 BCKDHAP12694 445 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 BDNFP23560 247 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SEC23BQ15437 767 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 KCTD9Q7L273 389 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 GPAT4Q86UL3 456 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF676Q8N7Q3 588 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 PNPLA2Q96AD5 504 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ALG2Q9H553 416 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SCP2D1Q9UJQ7 156 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 PCDHB1Q9Y5F3 818 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 MYH6P13533 1939 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 GADD45GO95257 159 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 GNPDA1P46926 289 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 CRADDP78560 199 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 TMED4Q7Z7H5 227 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 UNC5BQ8IZJ1 945 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 S100A16Q96FQ6 103 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SPON1Q9HCB6 807 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SNX15Q9NRS6 342 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 SERINC1Q9NRX5 453 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 H7C417 338 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 CLDN9O95484 217 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 IFNA17P01571 189 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 LIMK2P53671 638 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 DDR1Q08345 913 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 UROC1Q96N76 676 aa13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P12-202ENST00000559989 OAZ2O95190 189 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CCKBRP32239 447 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 MC4RP32245 332 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 IQCCQ4KMZ1 466 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 ABCA8O94911 1581 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CENPBD1B2RD01 187 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 HNRNPLP14866 589 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CHKAP35790 457 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CASRP41180 1078 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 AVPR1BP47901 424 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 BTG3Q14201 252 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CXorf21Q9HAI6 301 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 AGO4Q9HCK5 861 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 MAPK3P27361 379 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 ASB18Q6ZVZ8 466 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZSCAN1Q8NBB4 408 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 ACBD4Q8NC06 268 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC2A14Q8TDB8 520 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 RAB21Q9UL25 225 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms