RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 C2orf81A6NN90 581 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 MEN1O00255 615 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SPOPO43791 374 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 PDGFAP04085 211 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SLC35G4P0C7Q5 338 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 NFKB1P19838 968 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 PBLDP30039 288 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 CD68P34810 354 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 RRADP55042 308 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 RPS18P62269 152 aaKnown RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 ADCY2Q08462 1091 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 WASHC5Q12768 1159 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 GPR19Q15760 415 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 NADK2Q4G0N4 442 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 PLEKHS1Q5SXH7 462 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 KAZNQ674X7 775 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF449Q6P9G9 518 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 KDELC1Q6UW63 502 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 MFSD7Q6UXD7 560 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 CERS6Q6ZMG9 384 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 MED25Q71SY5 747 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 TMEM102Q8N9M5 508 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 IPMKQ8NFU5 416 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 OR4E2Q8NGC2 313 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SSC4DQ8WTU2 575 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 HEXDCQ8WVB3 486 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF501Q96CX3 271 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 CLIP3Q96DZ5 547 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 MRGPRX2Q96LB1 330 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 RUFY1Q96T51 708 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 DNAJC7Q99615 494 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 FERMT1Q9BQL6 677 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 NLNQ9BYT8 704 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SLC7A5P2Q9GIP4 190 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 CHST8Q9H2A9 424 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SLAMF7Q9NQ25 335 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 C1GALT1Q9NS00 363 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SMOXQ9NWM0 555 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SAE1Q9UBE0 346 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 PLEKHB1Q9UF11 243 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 BTRCQ9Y297 605 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 CFAP20Q9Y6A4 193 aaKnown RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 BOD1L1Q8NFC6 3051 aa8.94□□□□□ -0.98
HDDC3-204ENST00000559834 RP1L1Q8IWN7 2480 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 C5orf60A6NFR6 353 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 HACD1B0YJ81 288 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CFAP99D6REC4 459 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CBFA2T2O43439 604 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 BUD23O43709 281 aaKnown RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 KLHL41O60662 606 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CEACAM4O75871 244 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ANXA9O76027 345 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 SRP72O76094 671 aaKnown RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 TMEM63AO94886 807 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ZRANB2O95218 330 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 DDAH2O95865 285 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 POLBP06746 335 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 HBQ1P09105 142 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 POLR2CP19387 275 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 AGXTP21549 392 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 COMTP21964 271 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CDH3P22223 829 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CDKN2BP42772 138 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 PTGIRP43119 386 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CHRNA4P43681 627 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 PREPP48147 710 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 KPNA2P52292 529 aaKnown RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 GEMP55040 296 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CHAF1BQ13112 559 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 GPS2Q13227 327 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 LAMB3Q13751 1172 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 NOMO1Q15155 1222 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 TAF1AQ15573 450 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 TFDP3Q5H9I0 405 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 DET1Q7L5Y6 550 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 CFAP206Q8IYR0 622 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 RCOR2Q8IZ40 523 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 DSELQ8IZU8 1212 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF567Q8N184 647 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 SLC38A9Q8NBW4 561 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ACVR1CQ8NER5 493 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 LCN9Q8WX39 176 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 LINC00615Q96LM1 132 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 DPH2Q9BQC3 489 aaPredicted RBP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 SLC29A3Q9BZD2 475 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 SRMSQ9H3Y6 488 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ASB8Q9H765 288 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 RSPH14Q9UHP6 348 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 TCFL5Q9UL49 500 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 INTUQ9ULD6 942 aa8.93□□□□□ -0.98
HDDC3-204ENST00000559834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDDC3-204ENST00000559834 ESPL1Q14674 2120 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 SLC9B1P1A6NJY1 282 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 C9J4A7 227 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 IFRD1O00458 451 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 GAPDHSO14556 408 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms