RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 HM13Q8TCT9 377 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 EGFL8Q99944 293 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TSEN34Q9BSV6 310 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CHID1Q9BWS9 393 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CLPBQ9H078 707 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 RETREG1Q9H6L5 497 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CARS2Q9HA77 564 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF334Q9HCZ1 680 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TLR9Q9NR96 1032 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CLEC4EQ9ULY5 219 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 FADS3Q9Y5Q0 445 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 MAGED1Q9Y5V3 778 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 C1orf232A0A0U1RR37 186 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 LDLRP01130 860 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ENO2P09104 434 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 HTR1EP28566 365 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 HMGCLP35914 325 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 GGT5P36269 586 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ADARP55265 1226 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 BIRC2Q13490 618 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CDH18Q13634 790 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 PLCL1Q15111 1095 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ZIK1Q3SY52 487 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 SLC44A4Q53GD3 710 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TXNDC8Q6A555 127 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 DNAJC14Q6Y2X3 702 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ADAMTSL2Q86TH1 951 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 STK40Q8N2I9 435 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 PAPD5Q8NDF8 572 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ALG14Q96F25 216 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 NSMCE2Q96MF7 247 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CGREF1Q99674 301 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 LRRC3Q9BY71 257 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TMCO1Q9UM00 188 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TMX2-CTNND1H3BSU7 103 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PQBP1O60828 265 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 BMP10O95393 424 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF7P17097 686 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 HNF1BP35680 557 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 RPS9P46781 194 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 BFSP2Q13515 415 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 OTUD3Q5T2D3 398 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CHST15Q7LFX5 561 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 TSPAN33Q86UF1 283 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ZSWIM9Q86XI8 627 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CLVS1Q8IUQ0 354 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 TBC1D21Q8IYX1 336 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 DPP10Q8N608 796 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 FAM86B1Q8N7N1 296 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CLHC1Q8NHS4 586 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 MTFMTQ96DP5 389 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 MUC13Q9H3R2 512 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ZFYVE1Q9HBF4 777 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 MAGEE1Q9HCI5 957 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ZFP14Q9HCL3 533 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 IL26Q9NPH9 171 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 SMPD3Q9NY59 655 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ETAA1Q9NY74 926 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 WWOXQ9NZC7 414 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 EBF1Q9UH73 591 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PTBP2Q9UKA9 531 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 UTS2RQ9UKP6 389 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PHF24Q9UPV7 400 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CCL27Q9Y4X3 112 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 SCN5AQ14524 2016 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 TYW5A2RUC4 315 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 RAD51BO15315 384 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 GREM1O60565 184 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 EFEMP2O95967 443 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 FCGR1AP12314 374 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 BPIP17213 487 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 NFKBIAP25963 317 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CDK9P50750 372 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 NAA20P61599 178 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 KIAA0040Q15053 153 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CHRNA6Q15825 494 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 SPATS1Q496A3 300 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CYBRD1Q53TN4 286 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 INO80DQ53TQ3 878 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 DNAJB7Q7Z6W7 309 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ADGRG2Q8IZP9 1017 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 KRTCAP2Q8N6L1 136 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PDPRQ8NCN5 879 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PDLIM5Q96HC4 596 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 IGSF21Q96ID5 467 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 SEZ6LQ9BYH1 1024 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 IKZF5Q9H5V7 419 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 PFDN4Q9NQP4 134 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 VAPAQ9P0L0 249 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 KLQ9UEF7 1012 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 ANGPTL3Q9Y5C1 460 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms