RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PTTG2Q9NZH5 202 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 GMEB2Q9UKD1 530 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 COQ6Q9Y2Z9 468 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 STON1Q9Y6Q2 735 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SIPA1L1O43166 1804 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CCDC189A1A4V9 331 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 OGNP20774 298 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RPL14P50914 215 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 FBXW4P57775 412 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 HPCAP84074 193 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 MPP2Q14168 576 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RGS21Q2M5E4 152 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 FAM109BQ6ICB4 259 aaPredicted RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 C17orf64Q86WR6 236 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 TDRPQ86YL5 185 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SIDT2Q8NBJ9 832 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 FAM46DQ8NEK8 389 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RIN3Q8TB24 985 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 HERPUD2Q9BSE4 406 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RETREG1Q9H6L5 497 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 DNAAF2Q9NVR5 837 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC7A8Q9UHI5 535 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ITGB1BP2Q9UKP3 347 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 PADI4Q9UM07 663 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CCL26Q9Y258 94 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SIN3BO75182 1162 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 PGLSO95336 258 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 MLYCDO95822 493 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF30P17039 623 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 DEFA1P59665 94 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 DEFA3P59666 94 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ADGRD1Q6QNK2 874 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 C10orf107Q8IVU9 208 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 DCBLD1Q8N8Z6 715 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 LCN9Q8WX39 176 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 MYLIPQ8WY64 445 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 UBE2E3Q969T4 207 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ESAMQ96AP7 390 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 IMP4Q96G21 291 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF514Q96K75 400 aaPredicted RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 PLEKHG4BQ96PX9 1271 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 TPSD1Q9BZJ3 242 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CDH19Q9H159 772 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CROTQ9UKG9 612 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SOCS5O75159 536 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 TCEA3O75764 348 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ACTR3P61158 418 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RPL26P61254 145 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 NAA20P61599 178 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SKP1P63208 163 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CAPN13Q6MZZ7 669 aaPredicted RBP10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 TRNP1Q6NT89 227 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SCML4Q8N228 414 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF614Q8N883 585 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 C12orf66Q96MD2 445 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ZSCAN5AQ9BUG6 496 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 LMAN1LQ9HAT1 526 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 HEBP1Q9NRV9 189 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 PNPOQ9NVS9 261 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 ZDHHC3Q9NYG2 299 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 COPG2Q9UBF2 871 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 VTI1BQ9UEU0 232 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 CDH22Q9UJ99 828 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 SNX6Q9UNH7 406 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 PLLPQ9Y342 182 aa10.51□□□□□ -0.73
CARMIL3-202ENST00000559694 RGSL1A5PLK6 1076 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 LAMTOR5O43504 91 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RGS14O43566 566 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RECQL5O94762 991 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 PRAMEF12O95522 483 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ABCB1P08183 1280 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 MSS51Q4VC12 460 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 GPRIN3Q6ZVF9 776 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 CCDC80Q76M96 950 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 AMIGO2Q86SJ2 522 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 KBTBD6Q86V97 674 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 CHST14Q8NCH0 376 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 GTPBP2Q9BX10 602 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 PCDH12Q9NPG4 1184 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SELENONQ9NZV5 590 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 COLEC10Q9Y6Z7 277 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 TNFRSF10BO14763 440 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SMAD6O43541 496 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 STK16O75716 305 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 OTCP00480 354 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 BPGMP07738 259 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ANXA6P08133 673 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 PXNP49023 591 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 FBXO43Q4G163 708 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ANKRD54Q6NXT1 300 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 NPAS3Q8IXF0 933 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 DHRSXQ8N5I4 330 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 GPR156Q8NFN8 814 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RAD51AP1Q96B01 352 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 MARK4Q96L34 752 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SEPHS2Q99611 448 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms