RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCDC89Q8N998 374 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 OR4E2Q8NGC2 313 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 STYXQ8WUJ0 223 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 HDAC10Q969S8 669 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF778Q96MU6 729 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 OR6C1Q96RD1 312 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 FERD3LQ96RJ6 166 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 MAP3K3Q99759 626 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 DDA1Q9BW61 102 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 TLR10Q9BXR5 811 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 EPB41L1Q9H4G0 881 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 FEZ2Q9UHY8 353 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 PCDHGA3Q9Y5H0 932 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 SPTBP11277 2137 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 KALRNO60229 2985 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 IGHV5-51A0A0C4DH38 117 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 LOC101059948A0A1B0GTJ6 334 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 AGAP14A8MT82 685 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CFAP99D6REC4 459 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 OR1I1O60431 355 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 KCNJ13O60928 360 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 STK17BO94768 372 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 APRTP07741 180 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 PRKAR1AP10644 381 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 POLR2CP19387 275 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-208ENST00000558827 MSNP26038 577 aaKnown RBP12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ACRV1P26436 265 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 FDFT1P37268 417 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CAPZBP47756 277 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 VPS41P49754 854 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CRADDP78560 199 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CACNG1Q06432 222 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CEACAM20Q6UY09 585 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 GSTA5Q7RTV2 222 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 LDB1Q86U70 411 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-208ENST00000558827 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 OR6P1Q8NGX9 317 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ZDHHC12Q96GR4 267 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF514Q96K75 400 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CCM2Q9BSQ5 444 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ASPSCR1Q9BZE9 553 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 XKR8Q9H6D3 395 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 COG4Q9H9E3 785 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 FBXO8Q9NRD0 319 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 HRASLS2Q9NWW9 162 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 SIDT1Q9NXL6 827 aaKnown RBP12.22□□□□□ -0.45
SMAD3-208ENST00000558827 SLC24A2Q9UI40 661 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 PILRAQ9UKJ1 303 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 ACSL5Q9ULC5 683 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 CFAP46Q8IYW2 2715 aa12.22□□□□□ -0.45
SMAD3-208ENST00000558827 MROH6A6NGR9 719 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 PYCARD-AS1I3L0S3 204 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 NKX2-8O15522 239 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 KIAA0754O94854 1291 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 GOT2P00505 430 aaKnown RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 EBLN1P0CF75 366 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 FOLR1P15328 257 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 CD82P27701 267 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 PRLHRP49683 370 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 RAB15P59190 212 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 BASP1P80723 227 aaKnown RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 CDH17Q12864 832 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 LINC00303Q3SY05 128 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 TSTD2Q5T7W7 516 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 CES3Q6UWW8 571 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 LINC00523Q86TU6 105 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF843Q8N446 348 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ZSCAN1Q8NBB4 408 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 GALNT6Q8NCL4 622 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 HM13Q8TCT9 377 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 MS4A14Q96JA4 679 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ARHGAP9Q9BRR9 750 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF768Q9H5H4 540 aaKnown RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 IL17BQ9UHF5 180 aa12.21□□□□□ -0.45
SMAD3-208ENST00000558827 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 MRPS18BQ9Y676 258 aaKnown RBP12.21□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF462Q96JM2 2506 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF189O75820 626 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ZIC2O95409 532 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 TIAF1O95411 115 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 GAS8O95995 478 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 FOXN2P32314 431 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ARL4DP49703 201 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 NFKB2Q00653 900 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 SEMA3AQ14563 771 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms