RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CALCOCO2Q13137 446 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 GTF2H3Q13889 308 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 ITIH4Q14624 930 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 ZNF658BQ4V348 819 aaPredicted RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 BCL7AQ4VC05 210 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 GLE1Q53GS7 698 aaKnown RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 NEPROQ6NW34 567 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 ZCCHC8Q6NZY4 707 aaKnown RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 CERS6Q6ZMG9 384 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 UNC5AQ6ZN44 842 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 FAM83HQ6ZRV2 1179 aaPredicted RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 CENPUQ71F23 418 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 ANKMY2Q8IV38 441 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 NAGSQ8N159 534 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 EXD3Q8N9H8 876 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 HEXDCQ8WVB3 486 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 PATE1Q8WXA2 126 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 DCUN1D1Q96GG9 259 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 LINC00615Q96LM1 132 aaPredicted RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 TIMM29Q9BSF4 260 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 ZCCHC2Q9C0B9 1178 aaKnown RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 DPEP2Q9H4A9 486 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 EPB41L5Q9HCM4 733 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 DOLKQ9UPQ8 538 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 CHMP2BQ9UQN3 213 aa15.23■□□□□ 0.03
LINC01220-201ENST00000558575 DNMT3AQ9Y6K1 912 aaPredicted RBP15.23■□□□□ 0.03
LINC01220-201ENST00000558575 K7ENP7 123 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 NDC80O14777 642 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 DXOO77932 396 aaKnown RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 POLBP06746 335 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ALPPL2P10696 532 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 CKMT1AP12532 417 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 CKMT2P17540 419 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 PRLHRP49683 370 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 GABREP78334 506 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 CRYMQ14894 314 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ZNF789Q5FWF6 425 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 LYPLAL1Q5VWZ2 237 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 STEAP4Q687X5 459 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 INO80CQ6PI98 192 aaPredicted RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 PACS1Q6VY07 963 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 LILRA3Q8N6C8 439 aaPredicted RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 KYQ8NBH2 561 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ZDHHC1Q8WTX9 485 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 SCG3Q8WXD2 468 aaKnown RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 LRRC39Q96DD0 335 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 FAM117AQ9C073 453 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ASCL3Q9NQ33 180 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 PRDM8Q9NQV8 689 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 SCHIP1Q9P0W5 487 aaPredicted RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 SIRPGQ9P1W8 387 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 DNAJC16Q9Y2G8 782 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 HEMK1Q9Y5R4 338 aaPredicted RBP15.22■□□□□ 0.03
LINC01220-201ENST00000558575 BSNQ9UPA5 3926 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 ITPR2Q14571 2701 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 RELNP78509 3460 aa15.22■□□□□ 0.03
LINC01220-201ENST00000558575 TRBV23OR9-2A0A075B6M9 112 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 CFAP99D6REC4 459 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 CASC3O15234 703 aaKnown RBP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 S1PR4O95977 384 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 ERVK-10P10266 1014 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 RALBP11234 206 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 BRAFP15056 766 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 ACP1P24666 158 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 ECHS1P30084 290 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 NSG1P42857 185 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 CAV1Q03135 178 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 DMPKQ09013 629 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 NFE2L1Q14494 772 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 LONRF1Q17RB8 773 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 INSCQ1MX18 579 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 TYSND1Q2T9J0 566 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 SPANXN3Q5MJ09 141 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 TRMT10BQ6PF06 316 aaKnown RBP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 AMZ2Q86W34 360 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 CILP2Q8IUL8 1156 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 DENND6AQ8IWF6 608 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 ARL10Q8N8L6 244 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 OR2L2Q8NH16 312 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 CFAP36Q96G28 342 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 NAT9Q9BTE0 207 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 P2RY12Q9H244 342 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 C20orf96Q9NUD7 363 aaPredicted RBP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
LINC01220-201ENST00000558575 PADI4Q9UM07 663 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
LINC01220-201ENST00000558575 RP1P56715 2156 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 EME2A4GXA9 379 aaPredicted RBP15.2■□□□□ 0.02
LINC01220-201ENST00000558575 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 B4DGG1 531 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 EIF3HO15372 352 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC01220-201ENST00000558575 SNX2O60749 519 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 KCNJ13O60928 360 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 AP2A2O94973 939 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 TTC4O95801 387 aa15.2■□□□□ 0.02
LINC01220-201ENST00000558575 PAMP19021 973 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms